RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 EEF2P13639 858 aaKnown RBP18.08■□□□□ 0.48
DDR1-278ENST00000515233 SNX17Q15036 470 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 C1orf53Q5VUE5 145 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 DIEXFQ68CQ4 756 aaKnown RBP18.08■□□□□ 0.48
DDR1-278ENST00000515233 FAM109BQ6ICB4 259 aaPredicted RBP18.08■□□□□ 0.48
DDR1-278ENST00000515233 ZSCAN25Q6NSZ9 544 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 CTR9Q6PD62 1173 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 NRBP1Q9UHY1 535 aa18.08■□□□□ 0.48
DDR1-278ENST00000515233 CHGBP05060 677 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 PRAMEF19Q5SWL8 479 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 ANO1Q5XXA6 986 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 RIOX2Q8IUF8 465 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 PUS7LQ9H0K6 701 aaKnown RBP18.07■□□□□ 0.48
DDR1-278ENST00000515233 BCL11AQ9H165 835 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 DIS3Q9Y2L1 958 aaKnown RBP18.07■□□□□ 0.48
DDR1-278ENST00000515233 SLC4A4Q9Y6R1 1079 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 MYH7P12883 1935 aa18.07■□□□□ 0.48
DDR1-278ENST00000515233 LRRC41Q15345 812 aa18.06■□□□□ 0.48
DDR1-278ENST00000515233 LRRCC1Q9C099 1032 aa18.06■□□□□ 0.48
DDR1-278ENST00000515233 ATP11BQ9Y2G3 1177 aa18.06■□□□□ 0.48
DDR1-278ENST00000515233 COL11A1P12107 1806 aaPredicted RBP18.06■□□□□ 0.48
DDR1-278ENST00000515233 A0A0C4DFX4 3053 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 LTBP2Q14767 1821 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 VWA5AO00534 786 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 STAT3P40763 770 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 SBK1Q52WX2 424 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 GOPCQ9HD26 462 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 ARPP21Q9UBL0 812 aaPredicted RBP18.05■□□□□ 0.48
DDR1-278ENST00000515233 ZNF214Q9UL59 606 aaPredicted RBP18.05■□□□□ 0.48
DDR1-278ENST00000515233 PPP1R9AQ9ULJ8 1098 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 SMCHD1A6NHR9 2005 aa18.05■□□□□ 0.48
DDR1-278ENST00000515233 COPB2P35606 906 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 ADCYAP1R1P41586 468 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 ZNF792Q3KQV3 632 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 FAM47AQ5JRC9 791 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 REPS2Q8NFH8 660 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 STRBPQ96SI9 672 aaKnown RBP18.04■□□□□ 0.48
DDR1-278ENST00000515233 MMP19Q99542 508 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 TINF2Q9BSI4 451 aa18.04■□□□□ 0.48
DDR1-278ENST00000515233 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-278ENST00000515233 LAMA2P24043 3122 aaKnown RBP18.03■□□□□ 0.48
DDR1-278ENST00000515233 KCTD2Q14681 263 aa18.03■□□□□ 0.48
DDR1-278ENST00000515233 GIMAP6Q6P9H5 292 aa18.03■□□□□ 0.48
DDR1-278ENST00000515233 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
DDR1-278ENST00000515233 GREB1LQ9C091 1923 aaPredicted RBP18.02■□□□□ 0.48
DDR1-278ENST00000515233 PGK2P07205 417 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 RARBP10826 455 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 TRIM60Q495X7 471 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 FAM83BQ5T0W9 1011 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 XPNPEP3Q9NQH7 507 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 PDLIM7Q9NR12 457 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 ECHDC1Q9NTX5 307 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 NYAP2Q9P242 653 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 PLXNA1Q9UIW2 1896 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 RCAN3Q9UKA8 241 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 PHF24Q9UPV7 400 aa18.02■□□□□ 0.48
DDR1-278ENST00000515233 GSG1L2A8MUP6 293 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
DDR1-278ENST00000515233 ZNF865P0CJ78 1059 aaPredicted RBP18.01■□□□□ 0.47
DDR1-278ENST00000515233 SHHQ15465 462 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 RNF180Q86T96 592 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 BADQ92934 168 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 FERMT2Q96AC1 680 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 GUCD1Q96NT3 240 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 ROBO3Q96MS0 1386 aa18.01■□□□□ 0.47
DDR1-278ENST00000515233 TRIM43BA6NCK2 446 aa18■□□□□ 0.47
DDR1-278ENST00000515233 F5H6K3 240 aa18■□□□□ 0.47
DDR1-278ENST00000515233 SMARCA5O60264 1052 aaPredicted RBP18■□□□□ 0.47
DDR1-278ENST00000515233 RASA1P20936 1047 aa18■□□□□ 0.47
DDR1-278ENST00000515233 KLRC3Q07444 240 aa18■□□□□ 0.47
DDR1-278ENST00000515233 MSL3Q8N5Y2 521 aaKnown RBP18■□□□□ 0.47
DDR1-278ENST00000515233 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
DDR1-278ENST00000515233 PRPF38AQ8NAV1 312 aaKnown RBP18■□□□□ 0.47
DDR1-278ENST00000515233 TRIM43Q96BQ3 446 aaPredicted RBP18■□□□□ 0.47
DDR1-278ENST00000515233 MKNK2Q9HBH9 465 aa18■□□□□ 0.47
DDR1-278ENST00000515233 PRDM5Q9NQX1 630 aaPredicted RBP18■□□□□ 0.47
DDR1-278ENST00000515233 TACC3Q9Y6A5 838 aa18■□□□□ 0.47
DDR1-278ENST00000515233 AKR1A1P14550 325 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 TAL1P17542 331 aaPredicted RBP17.99■□□□□ 0.47
DDR1-278ENST00000515233 TLE2Q04725 743 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 SH3RF1Q7Z6J0 888 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 APPBP2Q92624 585 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 MKL1Q969V6 931 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 SLF1Q9BQI6 1058 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 TEX13BQ9BXU2 312 aa17.99■□□□□ 0.47
DDR1-278ENST00000515233 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 RAD21O60216 631 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 PGK1P00558 417 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 ZFYP08048 801 aaPredicted RBP17.98■□□□□ 0.47
DDR1-278ENST00000515233 C9orf50Q5SZB4 431 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 ZNF697Q5TEC3 545 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 MAMDC4Q6UXC1 1216 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 TSEN34Q9BSV6 310 aaKnown RBP17.98■□□□□ 0.47
DDR1-278ENST00000515233 DCTPP1Q9H773 170 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
DDR1-278ENST00000515233 DNAJC25-GNG10A0A024R161 153 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms