RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 NRBP1Q9UHY1 535 aa27.52■■■□□ 2
SMAD5-207ENST00000511116 UNC80Q8N2C7 3258 aa27.52■■■□□ 2
SMAD5-207ENST00000511116 SLC25A27O95847 323 aa27.51■■□□□ 1.99
SMAD5-207ENST00000511116 C1orf53Q5VUE5 145 aa27.51■■□□□ 1.99
SMAD5-207ENST00000511116 SLC39A5Q6ZMH5 540 aa27.51■■□□□ 1.99
SMAD5-207ENST00000511116 NCAPG2Q86XI2 1143 aa27.51■■□□□ 1.99
SMAD5-207ENST00000511116 KANSL2Q9H9L4 492 aa27.51■■□□□ 1.99
SMAD5-207ENST00000511116 FCER1AP12319 257 aa27.5■■□□□ 1.99
SMAD5-207ENST00000511116 EEF2P13639 858 aaKnown RBP27.5■■□□□ 1.99
SMAD5-207ENST00000511116 PLS1Q14651 629 aa27.5■■□□□ 1.99
SMAD5-207ENST00000511116 RIOX2Q8IUF8 465 aa27.5■■□□□ 1.99
SMAD5-207ENST00000511116 CHMP4BQ9H444 224 aaKnown RBP27.5■■□□□ 1.99
SMAD5-207ENST00000511116 ROBO3Q96MS0 1386 aa27.49■■□□□ 1.99
SMAD5-207ENST00000511116 KBTBD13C9JR72 458 aa27.49■■□□□ 1.99
SMAD5-207ENST00000511116 CTR9Q6PD62 1173 aa27.49■■□□□ 1.99
SMAD5-207ENST00000511116 AMOTL1Q8IY63 956 aa27.49■■□□□ 1.99
SMAD5-207ENST00000511116 SMCHD1A6NHR9 2005 aa27.49■■□□□ 1.99
SMAD5-207ENST00000511116 LRRC41Q15345 812 aa27.48■■□□□ 1.99
SMAD5-207ENST00000511116 PRAMEF19Q5SWL8 479 aa27.48■■□□□ 1.99
SMAD5-207ENST00000511116 ANO1Q5XXA6 986 aa27.48■■□□□ 1.99
SMAD5-207ENST00000511116 REPS2Q8NFH8 660 aa27.48■■□□□ 1.99
SMAD5-207ENST00000511116 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.48■■□□□ 1.99
SMAD5-207ENST00000511116 PUS7LQ9H0K6 701 aaKnown RBP27.48■■□□□ 1.99
SMAD5-207ENST00000511116 FBXO28Q9NVF7 368 aa27.48■■□□□ 1.99
SMAD5-207ENST00000511116 ZNF214Q9UL59 606 aaPredicted RBP27.48■■□□□ 1.99
SMAD5-207ENST00000511116 DIS3Q9Y2L1 958 aaKnown RBP27.48■■□□□ 1.99
SMAD5-207ENST00000511116 PRKAG2Q9UGJ0 569 aa27.47■■□□□ 1.99
SMAD5-207ENST00000511116 PPP1R9AQ9ULJ8 1098 aa27.47■■□□□ 1.99
SMAD5-207ENST00000511116 ATP11BQ9Y2G3 1177 aa27.47■■□□□ 1.99
SMAD5-207ENST00000511116 SLC4A4Q9Y6R1 1079 aa27.47■■□□□ 1.99
SMAD5-207ENST00000511116 VWA5AO00534 786 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 ZNF792Q3KQV3 632 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 FAM47AQ5JRC9 791 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 ZSCAN25Q6NSZ9 544 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 DDRGK1Q96HY6 314 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 PLXNA1Q9UIW2 1896 aa27.46■■□□□ 1.99
SMAD5-207ENST00000511116 GUCD1Q96NT3 240 aa27.45■■□□□ 1.98
SMAD5-207ENST00000511116 GOPCQ9HD26 462 aa27.45■■□□□ 1.98
SMAD5-207ENST00000511116 PDLIM7Q9NR12 457 aa27.45■■□□□ 1.98
SMAD5-207ENST00000511116 ARPP21Q9UBL0 812 aaPredicted RBP27.45■■□□□ 1.98
SMAD5-207ENST00000511116 PHF24Q9UPV7 400 aa27.45■■□□□ 1.98
SMAD5-207ENST00000511116 COPB2P35606 906 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 ADCYAP1R1P41586 468 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 TRIM60Q495X7 471 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 SBK1Q52WX2 424 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 MMP19Q99542 508 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 TINF2Q9BSI4 451 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 LRRCC1Q9C099 1032 aa27.44■■□□□ 1.98
SMAD5-207ENST00000511116 STAT3P40763 770 aa27.43■■□□□ 1.98
SMAD5-207ENST00000511116 DIEXFQ68CQ4 756 aaKnown RBP27.43■■□□□ 1.98
SMAD5-207ENST00000511116 GIMAP6Q6P9H5 292 aa27.43■■□□□ 1.98
SMAD5-207ENST00000511116 STRBPQ96SI9 672 aaKnown RBP27.43■■□□□ 1.98
SMAD5-207ENST00000511116 BCL11AQ9H165 835 aa27.42■■□□□ 1.98
SMAD5-207ENST00000511116 PGK2P07205 417 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 ZNF865P0CJ78 1059 aaPredicted RBP27.41■■□□□ 1.98
SMAD5-207ENST00000511116 RASA1P20936 1047 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 KCTD2Q14681 263 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 FAM83BQ5T0W9 1011 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 XPNPEP3Q9NQH7 507 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 NYAP2Q9P242 653 aa27.41■■□□□ 1.98
SMAD5-207ENST00000511116 TRIM43BA6NCK2 446 aa27.4■■□□□ 1.98
SMAD5-207ENST00000511116 GSG1L2A8MUP6 293 aa27.4■■□□□ 1.98
SMAD5-207ENST00000511116 RARBP10826 455 aa27.4■■□□□ 1.98
SMAD5-207ENST00000511116 SHHQ15465 462 aa27.4■■□□□ 1.98
SMAD5-207ENST00000511116 TRIM43Q96BQ3 446 aaPredicted RBP27.4■■□□□ 1.98
SMAD5-207ENST00000511116 TAL1P17542 331 aaPredicted RBP27.39■■□□□ 1.98
SMAD5-207ENST00000511116 C9orf50Q5SZB4 431 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 SAMD1Q6SPF0 538 aaPredicted RBP27.39■■□□□ 1.98
SMAD5-207ENST00000511116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.39■■□□□ 1.98
SMAD5-207ENST00000511116 SH3RF1Q7Z6J0 888 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 MSL3Q8N5Y2 521 aaKnown RBP27.39■■□□□ 1.98
SMAD5-207ENST00000511116 KBTBD3Q8NAB2 608 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 BADQ92934 168 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 FERMT2Q96AC1 680 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 ECHDC1Q9NTX5 307 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 RCAN3Q9UKA8 241 aa27.39■■□□□ 1.98
SMAD5-207ENST00000511116 IGKV6D-41A0A0C4DH26 115 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 ATP2A1O14983 1001 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 TLE2Q04725 743 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 SLF1Q9BQI6 1058 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 TEX13BQ9BXU2 312 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 PRDM5Q9NQX1 630 aaPredicted RBP27.38■■□□□ 1.97
SMAD5-207ENST00000511116 EYSQ5T1H1 3165 aa27.38■■□□□ 1.97
SMAD5-207ENST00000511116 CDH23Q9H251 3354 aa27.37■■□□□ 1.97
SMAD5-207ENST00000511116 DNAJC25-GNG10A0A024R161 153 aa27.37■■□□□ 1.97
SMAD5-207ENST00000511116 SMARCA5O60264 1052 aaPredicted RBP27.37■■□□□ 1.97
SMAD5-207ENST00000511116 ADAMTS4O75173 837 aa27.37■■□□□ 1.97
SMAD5-207ENST00000511116 RNF180Q86T96 592 aa27.37■■□□□ 1.97
SMAD5-207ENST00000511116 OSBP2Q969R2 916 aa27.37■■□□□ 1.97
SMAD5-207ENST00000511116 PGK1P00558 417 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 MYCNP04198 464 aaPredicted RBP27.36■■□□□ 1.97
SMAD5-207ENST00000511116 AKR1A1P14550 325 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 ZNF697Q5TEC3 545 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 MAMDC4Q6UXC1 1216 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 APPBP2Q92624 585 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 TACC3Q9Y6A5 838 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 SYNGAP1Q96PV0 1343 aa27.36■■□□□ 1.97
SMAD5-207ENST00000511116 F5H6K3 240 aa27.35■■□□□ 1.97
SMAD5-207ENST00000511116 NDUFB10O96000 172 aa27.35■■□□□ 1.97
SMAD5-207ENST00000511116 ITGB8P26012 769 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms