RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 TRIM32Q13049 653 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 NECTIN1Q15223 517 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 SAMD1Q6SPF0 538 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 MFSD6Q6ZSS7 791 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 STOX1Q6ZVD7 989 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 GPR142Q7Z601 462 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 GTF3C2Q8WUA4 911 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 LPAR1Q92633 364 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 SHISA4Q96DD7 197 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 ATG4CQ96DT6 458 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 NUP88Q99567 741 aaPredicted RBP18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 TMEM106CQ9BVX2 250 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 UNC93B1Q9H1C4 597 aa18.36■□□□□ 0.53
SH3TC1-220ENST00000511002 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 PLIN4Q96Q06 1357 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 RANBP6O60518 1105 aaKnown RBP18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 FLOT1O75955 427 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 SEC24BO95487 1268 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 DSG3P32926 999 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 COG2Q14746 738 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 FAM83BQ5T0W9 1011 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 ZNF444Q8N0Y2 327 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 PXYLP1Q8TE99 480 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 RNF41Q9H4P4 317 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 SH2D4AQ9H788 454 aa18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 TNRC18O15417 2968 aaPredicted RBP18.35■□□□□ 0.53
SH3TC1-220ENST00000511002 WDR46O15213 610 aaKnown RBP18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 RAD21O60216 631 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 PCP11498 1178 aaKnown RBP18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 CYP2B6P20813 491 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 MAPK4P31152 587 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 TFAP4Q01664 338 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 LRRC47Q8N1G4 583 aaKnown RBP18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 TRIB2Q92519 343 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 USP6NLQ92738 828 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 CLIP2Q9UDT6 1046 aa18.34■□□□□ 0.53
SH3TC1-220ENST00000511002 B4E1Z4 1266 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 E7EWF7 191 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 NDUFB10O96000 172 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 TSPY3P0CV98 308 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 TSPY8P0CW00 308 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 UBXN2AP68543 259 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 MORN1Q5T089 497 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 RNF208Q9H0X6 261 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 MTMR4Q9NYA4 1195 aa18.33■□□□□ 0.52
SH3TC1-220ENST00000511002 TSPY2A6NKD2 308 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 F5H6K3 240 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 NMT2O60551 498 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 KLRC3Q07444 240 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 CCL14Q16627 93 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 WDR78Q5VTH9 848 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 NUDT12Q9BQG2 462 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 HOXC10Q9NYD6 342 aa18.32■□□□□ 0.52
SH3TC1-220ENST00000511002 KDM4AO75164 1064 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 HSPA4P34932 840 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 ESR2Q92731 530 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 CNNM2Q9H8M5 875 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
SH3TC1-220ENST00000511002 GJB1P08034 283 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 PTPREP23469 700 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 CCNA1P78396 465 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 TMEM132BQ14DG7 1078 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 RASGRP2Q7LDG7 609 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 CCAR1Q8IX12 1150 aaKnown RBP18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 KRT23Q9C075 422 aa18.3■□□□□ 0.52
SH3TC1-220ENST00000511002 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 TTLL1O95922 423 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 HMGCRP04035 888 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 ERCC3P19447 782 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 GJA8P48165 433 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 MAP2K5Q13163 448 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 PLS1Q14651 629 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 REPS2Q8NFH8 660 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 U2AF1L4Q8WU68 220 aaKnown RBP18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 KCNB2Q92953 911 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 MKL1Q969V6 931 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 ZKSCAN3Q9BRR0 538 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 FLRT1Q9NZU1 646 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 PPP1R9AQ9ULJ8 1098 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 SNX14Q9Y5W7 946 aa18.29■□□□□ 0.52
SH3TC1-220ENST00000511002 RGS2P41220 211 aa18.28■□□□□ 0.52
SH3TC1-220ENST00000511002 TRDNQ13061 729 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms