RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 NRBP1Q9UHY1 535 aa18.46■□□□□ 0.55
SMAD5-205ENST00000509297 FRMPD3Q5JV73 1810 aa18.46■□□□□ 0.55
SMAD5-205ENST00000509297 TTC41PQ6P2S7 1318 aa18.46■□□□□ 0.55
SMAD5-205ENST00000509297 PARP14Q460N5 1801 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 SEPT4O43236 478 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 FCER1AP12319 257 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 RASA1P20936 1047 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 CNGA1P29973 690 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 COPB2P35606 906 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 PLS1Q14651 629 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 LRIT3Q3SXY7 679 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 RIOX2Q8IUF8 465 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 ARRDC4Q8NCT1 418 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 NYAP2Q9P242 653 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 PPP1R9AQ9ULJ8 1098 aa18.45■□□□□ 0.54
SMAD5-205ENST00000509297 GREB1LQ9C091 1923 aaPredicted RBP18.45■□□□□ 0.54
SMAD5-205ENST00000509297 VWA5AO00534 786 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 SOX1O00570 391 aaPredicted RBP18.44■□□□□ 0.54
SMAD5-205ENST00000509297 SYN1P17600 705 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 MKNK2Q9HBH9 465 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 ZNF287Q9HBT7 754 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 FBXO28Q9NVF7 368 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 SYNPO2Q9UMS6 1093 aa18.44■□□□□ 0.54
SMAD5-205ENST00000509297 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
SMAD5-205ENST00000509297 GPAA1O43292 621 aa18.43■□□□□ 0.54
SMAD5-205ENST00000509297 STAT3P40763 770 aa18.43■□□□□ 0.54
SMAD5-205ENST00000509297 TDHQ8IZJ6 230 aa18.43■□□□□ 0.54
SMAD5-205ENST00000509297 REPS2Q8NFH8 660 aa18.43■□□□□ 0.54
SMAD5-205ENST00000509297 SENP6Q9GZR1 1112 aaPredicted RBP18.43■□□□□ 0.54
SMAD5-205ENST00000509297 ZNF214Q9UL59 606 aaPredicted RBP18.43■□□□□ 0.54
SMAD5-205ENST00000509297 IGKV6D-41A0A0C4DH26 115 aa18.42■□□□□ 0.54
SMAD5-205ENST00000509297 ERC2O15083 957 aa18.42■□□□□ 0.54
SMAD5-205ENST00000509297 FAM83BQ5T0W9 1011 aa18.42■□□□□ 0.54
SMAD5-205ENST00000509297 MKL1Q969V6 931 aa18.42■□□□□ 0.54
SMAD5-205ENST00000509297 EPB41L4AQ9HCS5 686 aaPredicted RBP18.42■□□□□ 0.54
SMAD5-205ENST00000509297 MINDY4BA8MYZ0 360 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 PATL2C9JE40 543 aaKnown RBP18.41■□□□□ 0.54
SMAD5-205ENST00000509297 F5H6K3 240 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 KLRC3Q07444 240 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 KCTD2Q14681 263 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 TSHZ3Q63HK5 1081 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 PI4K2BQ8TCG2 481 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 LRCH3Q96II8 777 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 MMP19Q99542 508 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 SLF1Q9BQI6 1058 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 UBE2OQ9C0C9 1292 aaKnown RBP18.41■□□□□ 0.54
SMAD5-205ENST00000509297 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
SMAD5-205ENST00000509297 M0R2C6 588 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 ATP2A1O14983 1001 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 TDO2P48775 406 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 ZNF792Q3KQV3 632 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 PRPF38AQ8NAV1 312 aaKnown RBP18.4■□□□□ 0.54
SMAD5-205ENST00000509297 TINF2Q9BSI4 451 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 TEX13BQ9BXU2 312 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 NACAP1Q9BZK3 213 aa18.4■□□□□ 0.54
SMAD5-205ENST00000509297 KBTBD13C9JR72 458 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 NDUFB10O96000 172 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 SNX17Q15036 470 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 C1orf53Q5VUE5 145 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
SMAD5-205ENST00000509297 IFNL3Q8IZI9 196 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 ZNF444Q8N0Y2 327 aaPredicted RBP18.39■□□□□ 0.53
SMAD5-205ENST00000509297 MSL3Q8N5Y2 521 aaKnown RBP18.39■□□□□ 0.53
SMAD5-205ENST00000509297 PLIN4Q96Q06 1357 aa18.39■□□□□ 0.53
SMAD5-205ENST00000509297 COL6A3P12111 3177 aa18.38■□□□□ 0.53
SMAD5-205ENST00000509297 APPP05067 770 aa18.38■□□□□ 0.53
SMAD5-205ENST00000509297 GJC2Q5T442 439 aaPredicted RBP18.38■□□□□ 0.53
SMAD5-205ENST00000509297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMAD5-205ENST00000509297 GMCL1P1Q8NEA9 526 aa18.38■□□□□ 0.53
SMAD5-205ENST00000509297 MTMR4Q9NYA4 1195 aa18.38■□□□□ 0.53
SMAD5-205ENST00000509297 COL11A1P12107 1806 aaPredicted RBP18.37■□□□□ 0.53
SMAD5-205ENST00000509297 RAD21O60216 631 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 TTLL1O95922 423 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 PGK2P07205 417 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
SMAD5-205ENST00000509297 RTP1P59025 263 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 PDE4BQ07343 736 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 LRRC41Q15345 812 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 ZMYM1Q5SVZ6 1142 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 PRAMEF19Q5SWL8 479 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 SLC39A5Q6ZMH5 540 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 NEDD1Q8NHV4 660 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 NUP88Q99567 741 aaPredicted RBP18.37■□□□□ 0.53
SMAD5-205ENST00000509297 LBHD1Q9BQE6 289 aaPredicted RBP18.37■□□□□ 0.53
SMAD5-205ENST00000509297 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
SMAD5-205ENST00000509297 LAMA2P24043 3122 aaKnown RBP18.37■□□□□ 0.53
SMAD5-205ENST00000509297 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
SMAD5-205ENST00000509297 RARBP10826 455 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 MX1P20591 662 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 OAZ1P54368 228 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 SNRNP48Q6IEG0 339 aaKnown RBP18.36■□□□□ 0.53
SMAD5-205ENST00000509297 FSD1Q9BTV5 496 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 SALL3Q9BXA9 1300 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 PRKAG2Q9UGJ0 569 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
SMAD5-205ENST00000509297 ZNFX1Q9P2E3 1918 aaKnown RBP18.35■□□□□ 0.53
SMAD5-205ENST00000509297 SYNGAP1Q96PV0 1343 aa18.35■□□□□ 0.53
SMAD5-205ENST00000509297 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms