RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 KCNH4Q9UQ05 1017 aa5□□□□□ -1.61
ATP2C1-213ENST00000508297 SAMM50Q9Y512 469 aa5□□□□□ -1.61
ATP2C1-213ENST00000508297 ERCC6Q03468 1493 aa5□□□□□ -1.61
ATP2C1-213ENST00000508297 FRMPD2Q68DX3 1309 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 DYTNA2CJ06 578 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 BLACEA4D250 179 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 MAN1A2O60476 641 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 MT-CO1P00395 513 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 CAPNS1P04632 268 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ITGAVP06756 1048 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 CT47B1P0C2W7 299 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 NFKB1P19838 968 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 LPOP22079 712 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 POLR2BP30876 1174 aaKnown RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 SARSP49591 514 aaKnown RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 PPM1FP49593 454 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 GSK3AP49840 483 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 WDR4P57081 412 aaKnown RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 SUMO1P63165 101 aaKnown RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ATP11AP98196 1134 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 CHAF1AQ13111 956 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 INPP5AQ14642 412 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ODF1Q14990 250 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 INAVAQ3KP66 663 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ARHGAP29Q52LW3 1261 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ALFQ53S48 1182 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 CCDC70Q6NSX1 233 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 GPAT2Q6NUI2 795 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 XRRA1Q6P2D8 792 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 FAM43BQ6ZT52 329 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 PDZD3Q86UT5 571 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 PPFIBP1Q86W92 1011 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 C1orf131Q8NDD1 294 aaKnown RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 HERPUD2Q9BSE4 406 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 RASSF4Q9H2L5 321 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 RUBCNLQ9H714 662 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 CNNM2Q9H8M5 875 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 EFCC1Q9HA90 598 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 GMIPQ9P107 970 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 FNIP2Q9P278 1114 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 APEX2Q9UBZ4 518 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 GJA3Q9Y6H8 435 aa4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 MORC2Q9Y6X9 1032 aaPredicted RBP4.99□□□□□ -1.61
ATP2C1-213ENST00000508297 ZNF891A8MT65 544 aaPredicted RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 PRSS47A8MTI9 375 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 J3QW42 95 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 AGRPO00253 132 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 TNFRSF10CO14798 259 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 B3GALT4O96024 378 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 ASLP04424 464 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 PHKG2P15735 406 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 TIMP2P16035 220 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 RHOQP17081 205 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 LIG1P18858 919 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 KCNQ4P56696 695 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 PCDH1Q08174 1060 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 STK3Q13188 491 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 KCTD2Q14681 263 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 MAP1SQ66K74 1059 aaPredicted RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 C1orf228Q6PIY5 440 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 NSMFQ6X4W1 530 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 IFNL2Q8IZJ0 200 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 CNPY4Q8N129 248 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 NXPE1Q8N323 547 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 CPA6Q8N4T0 437 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 GSTCDQ8NEC7 633 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 ATXN2LQ8WWM7 1075 aaKnown RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 GJA10Q969M2 543 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 CLEC4MQ9H2X3 399 aaPredicted RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 GPAMQ9HCL2 828 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 TCF7L1Q9HCS4 588 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 POLMQ9NP87 494 aaPredicted RBP4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 ZNF69Q9UC07 566 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 GTF2A1LQ9UNN4 478 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 ADAMTS8Q9UP79 889 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 PCDHGB3Q9Y5G1 929 aa4.98□□□□□ -1.61
ATP2C1-213ENST00000508297 CHURC1-FNTBB4DL54 471 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 PRRT4C9JH25 899 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 TP53P04637 393 aaPredicted RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 ASGR2P07307 311 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 FGFR1P11362 822 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 SOX18P35713 384 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 ERVK-21P61565 698 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 CFAP100Q494V2 611 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 WIPI1Q5MNZ9 446 aaPredicted RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 CDCP2Q5VXM1 449 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 LVRNQ6Q4G3 990 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 ZNF227Q86WZ6 799 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 CLASRPQ8N2M8 674 aaKnown RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 ZNF513Q8N8E2 541 aaPredicted RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 LRRN4CLQ8ND94 238 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 NGDNQ8NEJ9 315 aaKnown RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 CDC5LQ99459 802 aaKnown RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 POP1Q99575 1024 aaKnown RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 NAA15Q9BXJ9 866 aaKnown RBP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 PBX4Q9BYU1 374 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 DDX21Q9NR30 783 aaKnown RBP eCLIP4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 STRN4Q9NRL3 753 aa4.97□□□□□ -1.61
ATP2C1-213ENST00000508297 SAGE1Q9NXZ1 904 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms