RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
ATP2C1-213ENST00000508297 CHIC1Q5VXU3 224 aa14.06□□□□□ -0.16
ATP2C1-213ENST00000508297 SENP3Q9H4L4 574 aaPredicted RBP12.88□□□□□ -0.35
ATP2C1-213ENST00000508297 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
ATP2C1-213ENST00000508297 FOXD1Q16676 465 aa11.95□□□□□ -0.5
ATP2C1-213ENST00000508297 POTEDQ86YR6 584 aa11.64□□□□□ -0.55
ATP2C1-213ENST00000508297 MSH5O43196 834 aa11.43□□□□□ -0.58
ATP2C1-213ENST00000508297 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
ATP2C1-213ENST00000508297 PLPPR3Q6T4P5 718 aa11□□□□□ -0.65
ATP2C1-213ENST00000508297 PPP6R1Q9UPN7 881 aa10.87□□□□□ -0.67
ATP2C1-213ENST00000508297 ADRA2BP18089 450 aa10.86□□□□□ -0.67
ATP2C1-213ENST00000508297 DMRT2Q9Y5R5 561 aa10.11□□□□□ -0.79
ATP2C1-213ENST00000508297 SCAF1Q9H7N4 1312 aaKnown RBP10.1□□□□□ -0.79
ATP2C1-213ENST00000508297 MAPK8IP2Q13387 824 aaPredicted RBP10.06□□□□□ -0.8
ATP2C1-213ENST00000508297 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
ATP2C1-213ENST00000508297 EHMT2Q96KQ7 1210 aa9.9□□□□□ -0.82
ATP2C1-213ENST00000508297 DCAF8L1A6NGE4 600 aa9.81□□□□□ -0.84
ATP2C1-213ENST00000508297 RNF39Q9H2S5 420 aa9.64□□□□□ -0.87
ATP2C1-213ENST00000508297 KCNA4P22459 653 aa9.6□□□□□ -0.87
ATP2C1-213ENST00000508297 HOXD11P31277 338 aaPredicted RBP9.6□□□□□ -0.87
ATP2C1-213ENST00000508297 C1QBPQ07021 282 aaKnown RBP9.55□□□□□ -0.88
ATP2C1-213ENST00000508297 PPP4R3CPQ6ZMV5 832 aa9.55□□□□□ -0.88
ATP2C1-213ENST00000508297 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
ATP2C1-213ENST00000508297 RNF216Q9NWF9 866 aaPredicted RBP9.48□□□□□ -0.89
ATP2C1-213ENST00000508297 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
ATP2C1-213ENST00000508297 CSRNP3Q8WYN3 585 aa9.43□□□□□ -0.9
ATP2C1-213ENST00000508297 DNAJC5BQ9UF47 199 aa9.39□□□□□ -0.91
ATP2C1-213ENST00000508297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.24□□□□□ -0.93
ATP2C1-213ENST00000508297 SLC4A1APQ9BWU0 796 aaKnown RBP9.21□□□□□ -0.94
ATP2C1-213ENST00000508297 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
ATP2C1-213ENST00000508297 POTEHQ6S545 545 aa9.1□□□□□ -0.95
ATP2C1-213ENST00000508297 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
ATP2C1-213ENST00000508297 CAPN15O75808 1086 aa8.96□□□□□ -0.98
ATP2C1-213ENST00000508297 AMER1Q5JTC6 1135 aaPredicted RBP8.94□□□□□ -0.98
ATP2C1-213ENST00000508297 DSG3P32926 999 aa8.92□□□□□ -0.98
ATP2C1-213ENST00000508297 NPM3O75607 178 aaKnown RBP8.91□□□□□ -0.98
ATP2C1-213ENST00000508297 ZBTB22O15209 634 aa8.9□□□□□ -0.98
ATP2C1-213ENST00000508297 U3KPZ7 1027 aaPredicted RBP8.9□□□□□ -0.98
ATP2C1-213ENST00000508297 SPINK5Q9NQ38 1064 aaPredicted RBP8.86□□□□□ -0.99
ATP2C1-213ENST00000508297 APLP2Q06481 763 aa8.81□□□□□ -1
ATP2C1-213ENST00000508297 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
ATP2C1-213ENST00000508297 TRHP20396 242 aaPredicted RBP8.73□□□□□ -1.01
ATP2C1-213ENST00000508297 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.69□□□□□ -1.02
ATP2C1-213ENST00000508297 HNRNPUL2Q1KMD3 747 aaKnown RBP8.69□□□□□ -1.02
ATP2C1-213ENST00000508297 ABCB7O75027 752 aa8.67□□□□□ -1.02
ATP2C1-213ENST00000508297 RBM42Q9BTD8 480 aaKnown RBP8.64□□□□□ -1.03
ATP2C1-213ENST00000508297 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
ATP2C1-213ENST00000508297 SLC4A2P04920 1241 aa8.56□□□□□ -1.04
ATP2C1-213ENST00000508297 FOXD4L1Q9NU39 408 aa8.52□□□□□ -1.05
ATP2C1-213ENST00000508297 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
ATP2C1-213ENST00000508297 FKBP8Q14318 412 aa8.44□□□□□ -1.06
ATP2C1-213ENST00000508297 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
ATP2C1-213ENST00000508297 POLA2Q14181 598 aa8.39□□□□□ -1.07
ATP2C1-213ENST00000508297 SP7Q8TDD2 431 aaPredicted RBP8.38□□□□□ -1.07
ATP2C1-213ENST00000508297 MYCNP04198 464 aaPredicted RBP8.33□□□□□ -1.08
ATP2C1-213ENST00000508297 AKT1S1Q96B36 256 aa8.32□□□□□ -1.08
ATP2C1-213ENST00000508297 ZBTB12Q9Y330 459 aaPredicted RBP8.29□□□□□ -1.08
ATP2C1-213ENST00000508297 PLCB2Q00722 1185 aa8.26□□□□□ -1.09
ATP2C1-213ENST00000508297 HAX1O00165 279 aa8.22□□□□□ -1.09
ATP2C1-213ENST00000508297 REM2Q8IYK8 340 aaPredicted RBP8.2□□□□□ -1.1
ATP2C1-213ENST00000508297 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
ATP2C1-213ENST00000508297 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
ATP2C1-213ENST00000508297 HAP1P54257 671 aaPredicted RBP8.17□□□□□ -1.1
ATP2C1-213ENST00000508297 BCANQ96GW7 911 aa8.17□□□□□ -1.1
ATP2C1-213ENST00000508297 OSCARQ8IYS5 282 aa8.12□□□□□ -1.11
ATP2C1-213ENST00000508297 PITPNM1O00562 1244 aa8.1□□□□□ -1.11
ATP2C1-213ENST00000508297 FXR2P51116 673 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATP2C1-213ENST00000508297 ATXN8OSP0DMR3 200 aa8.09□□□□□ -1.11
ATP2C1-213ENST00000508297 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
ATP2C1-213ENST00000508297 ATF5Q9Y2D1 282 aaPredicted RBP8.04□□□□□ -1.12
ATP2C1-213ENST00000508297 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
ATP2C1-213ENST00000508297 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
ATP2C1-213ENST00000508297 SPDYE2BA6NHP3 402 aa7.96□□□□□ -1.14
ATP2C1-213ENST00000508297 SPDYE6P0CI01 402 aa7.96□□□□□ -1.14
ATP2C1-213ENST00000508297 SPDYE2Q495Y8 402 aa7.96□□□□□ -1.14
ATP2C1-213ENST00000508297 DAXXQ9UER7 740 aaPredicted RBP7.96□□□□□ -1.14
ATP2C1-213ENST00000508297 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.14
ATP2C1-213ENST00000508297 DCAF8L2P0C7V8 631 aa7.94□□□□□ -1.14
ATP2C1-213ENST00000508297 EVX2Q03828 476 aa7.94□□□□□ -1.14
ATP2C1-213ENST00000508297 FBLN2P98095 1184 aa7.93□□□□□ -1.14
ATP2C1-213ENST00000508297 PRKAR2AP13861 404 aaKnown RBP7.92□□□□□ -1.14
ATP2C1-213ENST00000508297 SPDYE1Q8NFV5 336 aaPredicted RBP7.92□□□□□ -1.14
ATP2C1-213ENST00000508297 CLEC11AQ9Y240 323 aa7.92□□□□□ -1.14
ATP2C1-213ENST00000508297 TULP1O00294 542 aaPredicted RBP7.9□□□□□ -1.14
ATP2C1-213ENST00000508297 LHX8Q68G74 356 aa7.86□□□□□ -1.15
ATP2C1-213ENST00000508297 C19orf67A6NJJ6 358 aa7.85□□□□□ -1.15
ATP2C1-213ENST00000508297 GABBR2O75899 941 aa7.83□□□□□ -1.16
ATP2C1-213ENST00000508297 PKD2Q13563 968 aa7.82□□□□□ -1.16
ATP2C1-213ENST00000508297 ARXQ96QS3 562 aa7.82□□□□□ -1.16
ATP2C1-213ENST00000508297 ZNF692Q9BU19 519 aaPredicted RBP7.81□□□□□ -1.16
ATP2C1-213ENST00000508297 FBXO3Q9UK99 471 aa7.79□□□□□ -1.16
ATP2C1-213ENST00000508297 IFNLR1Q8IU57 520 aaPredicted RBP7.78□□□□□ -1.16
ATP2C1-213ENST00000508297 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
ATP2C1-213ENST00000508297 NPM1P06748 294 aaKnown RBP eCLIP7.76□□□□□ -1.17
ATP2C1-213ENST00000508297 VASPP50552 380 aaPredicted RBP7.76□□□□□ -1.17
ATP2C1-213ENST00000508297 PAXIP1Q6ZW49 1069 aaPredicted RBP7.76□□□□□ -1.17
ATP2C1-213ENST00000508297 PRR29P0C7W0 189 aa7.75□□□□□ -1.17
ATP2C1-213ENST00000508297 SSUH2Q9Y2M2 353 aa7.74□□□□□ -1.17
ATP2C1-213ENST00000508297 BBXQ8WY36 941 aaPredicted RBP7.73□□□□□ -1.17
ATP2C1-213ENST00000508297 CFAP44Q96MT7 982 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms