RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 GTF2F1P35269 517 aaKnown RBP eCLIP14.86□□□□□ -0.03
GARNL3-220ENST00000496711 UBASH3AP57075 661 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 TPD52L1Q16890 204 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-220ENST00000496711 WWC2Q6AWC2 1192 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 FAM177A1Q8N128 213 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-220ENST00000496711 DAGLBQ8NCG7 672 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 FANCLQ9NW38 375 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 DAGLAQ9Y4D2 1042 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 PLIN4Q96Q06 1357 aa14.86□□□□□ -0.03
GARNL3-220ENST00000496711 ADAMTS3O15072 1205 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 SFPQP23246 707 aaKnown RBP eCLIP14.85□□□□□ -0.03
GARNL3-220ENST00000496711 MCM7P33993 719 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 GTF2IP78347 998 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 GALNT17Q6IS24 598 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 PAGE5Q96GU1 130 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 PYM1Q9BRP8 204 aaKnown RBP14.85□□□□□ -0.03
GARNL3-220ENST00000496711 SPZ1Q9BXG8 430 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
GARNL3-220ENST00000496711 GREB1LQ9C091 1923 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 M0R2N6 131 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 CYTH3O43739 400 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 CFAP100Q494V2 611 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 ARL6IP4Q66PJ3 421 aaKnown RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 ARMCX5Q6P1M9 558 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 HEATR3Q7Z4Q2 680 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 NLGN1Q8N2Q7 840 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 ENOX1Q8TC92 643 aaKnown RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 DPF2Q92785 391 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 BARHL2Q9NY43 387 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 MTMR7Q9Y216 660 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 MYH4Q9Y623 1939 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 CCDC194A0A1B0GVG4 234 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 STXBP3O00186 592 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 RIMBP2O15034 1052 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 NRDCO43847 1150 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 PARP1P09874 1014 aaKnown RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 SRGNP10124 158 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 TNNT1P13805 278 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 NPR1P16066 1061 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 ERCC5P28715 1186 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 AFMP43652 599 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 CT47A1Q5JQC4 288 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 KCND1Q9NSA2 647 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 NFE2L3Q9Y4A8 694 aa14.84□□□□□ -0.03
GARNL3-220ENST00000496711 ZNF646O15015 1829 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-220ENST00000496711 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.03
GARNL3-220ENST00000496711 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.03
GARNL3-220ENST00000496711 KLRF2D3W0D1 207 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
GARNL3-220ENST00000496711 DPYDQ12882 1025 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 VSTM4Q8IW00 320 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 RASGRP4Q8TDF6 673 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 GSDMAQ96QA5 445 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 PCDHA6Q9UN73 950 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 PCDHA8Q9Y5H6 950 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 C10orf71Q711Q0 1435 aa14.83□□□□□ -0.04
GARNL3-220ENST00000496711 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.04
GARNL3-220ENST00000496711 USP27XA6NNY8 438 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 GOLGA8HP0CJ92 632 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 ZNF18P17022 549 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 LONP1P36776 959 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 KCNJ6P48051 423 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 NOVP48745 357 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 E2F4Q16254 413 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 RASGRP2Q7LDG7 609 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 COL23A1Q86Y22 540 aaPredicted RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 TRMT44Q8IYL2 757 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 CCAR2Q8N163 923 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 IQUBQ8NA54 791 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 CCDC12Q8WUD4 166 aaPredicted RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 CEP95Q96GE4 821 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 ZC3H12CQ9C0D7 883 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 RIOK3O14730 519 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 RRP9O43818 475 aaKnown RBP14.82□□□□□ -0.04
GARNL3-220ENST00000496711 TXLNAP40222 546 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 IL17AQ16552 155 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 C4orf32Q8N8J7 132 aa14.82□□□□□ -0.04
GARNL3-220ENST00000496711 SYNRGQ9UMZ2 1314 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 SMARCA1P28370 1054 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 ALDH1B1P30837 517 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 PDE6BP35913 854 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 PICALMQ13492 652 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 PDXDC2PQ6P474 469 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 DPP8Q6V1X1 898 aaPredicted RBP14.81□□□□□ -0.04
GARNL3-220ENST00000496711 NYAP1Q6ZVC0 841 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 CERS5Q8N5B7 392 aa14.81□□□□□ -0.04
GARNL3-220ENST00000496711 TMEM232C9JQI7 657 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 PLSCR1O15162 318 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 NAPAP54920 295 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 CCDC112Q8NEF3 446 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 RRP36Q96EU6 259 aaKnown RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 ZMYND12Q9H0C1 365 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 INTS13Q9NVM9 706 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 SEC63Q9UGP8 760 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms