RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MMP10P09238 476 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 SRGNP10124 158 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 U2AF2P26368 475 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP39-219ENST00000496047 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 PTGDRQ13258 359 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 SLC39A14Q15043 492 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 NTRK3Q16288 839 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 CAMK4Q16566 473 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 C12orf60Q5U649 245 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 RBM43Q6ZSC3 357 aaKnown RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 ZSCAN30Q86W11 494 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 COL23A1Q86Y22 540 aaPredicted RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 NOSTRINQ8IVI9 506 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 DIS3L2Q8IYB7 885 aaKnown RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 DNAJC5GQ8N7S2 189 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 ZNF454Q8N9F8 522 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 SH3RF3Q8TEJ3 882 aaPredicted RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 ZNF622Q969S3 477 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP39-219ENST00000496047 PGBD1Q96JS3 809 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 PDLIM2Q96JY6 352 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 PYM1Q9BRP8 204 aaKnown RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.95□□□□□ -1.14
USP39-219ENST00000496047 RTFDC1Q9BY42 306 aaPredicted RBP7.95□□□□□ -1.14
USP39-219ENST00000496047 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 TCP11L1Q9NUJ3 509 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 JAG2Q9Y219 1238 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 GAKO14976 1311 aa7.95□□□□□ -1.14
USP39-219ENST00000496047 GPR37O15354 613 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 PPFIA3O75145 1194 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 PRDM1O75626 825 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 APLP1P51693 650 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 FKBP1AP62942 108 aaKnown RBP7.94□□□□□ -1.14
USP39-219ENST00000496047 GTF2IP78347 998 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 TFAP4Q01664 338 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 DHX8Q14562 1220 aaKnown RBP7.94□□□□□ -1.14
USP39-219ENST00000496047 ZNF827Q17R98 1081 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 ANO6Q4KMQ2 910 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 OTUD7BQ6GQQ9 843 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 KANK3Q6NY19 840 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 C2CD5Q86YS7 1000 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 CKAP2LQ8IYA6 745 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 TIGD1Q96MW7 591 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 SYT17Q9BSW7 474 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 FUCA2Q9BTY2 467 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 SH3GLB2Q9NR46 395 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 SWAP70Q9UH65 585 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 DACH1Q9UI36 760 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 PCDHA7Q9UN72 937 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 MYO3BQ8WXR4 1341 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 CNTNAP5Q8WYK1 1306 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 SIPA1L1O43166 1804 aa7.94□□□□□ -1.14
USP39-219ENST00000496047 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
USP39-219ENST00000496047 CYP2D7A0A087X1C5 515 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 KIF28PB7ZC32 967 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 hCG_1984214I3L0E3 225 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 IRF6O14896 467 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 NRDCO43847 1150 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 SCG2P13521 617 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 CMA1P23946 247 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 TXLNAP40222 546 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 SYKP43405 635 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 TRAPPC10P48553 1259 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 ZNF165P49910 485 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 NLRP5P59047 1200 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 DIXDC1Q155Q3 683 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 GALNT17Q6IS24 598 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 C16orf86Q6ZW13 317 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 PODNQ7Z5L7 613 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.93□□□□□ -1.14
USP39-219ENST00000496047 NBPF11Q86T75 865 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 MAPKAPK5Q8IW41 473 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 ZNF713Q8N859 430 aaPredicted RBP7.93□□□□□ -1.14
USP39-219ENST00000496047 PNMA1Q8ND90 353 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 ZNF384Q8TF68 577 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 TEKT1Q969V4 418 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 SENP2Q9HC62 589 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 INCENPQ9NQS7 918 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 FAM217BQ9NTX9 383 aaPredicted RBP7.93□□□□□ -1.14
USP39-219ENST00000496047 POLLQ9UGP5 575 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 SEC63Q9UGP8 760 aaKnown RBP7.93□□□□□ -1.14
USP39-219ENST00000496047 USP25Q9UHP3 1055 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 CLIC4Q9Y696 253 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 MRVI1Q9Y6F6 885 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 MORC2Q9Y6X9 1032 aaPredicted RBP7.93□□□□□ -1.14
USP39-219ENST00000496047 FLT1P17948 1338 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 PLIN4Q96Q06 1357 aa7.93□□□□□ -1.14
USP39-219ENST00000496047 RBBP6Q7Z6E9 1792 aaKnown RBP7.92□□□□□ -1.14
USP39-219ENST00000496047 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 TRIM75PA6NK02 468 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 SMTNL1A8MU46 457 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 TRIM66O15016 1216 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 ADCY5O95622 1261 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 CLCN1P35523 988 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 GRM4Q14833 912 aa7.92□□□□□ -1.14
USP39-219ENST00000496047 FAM47AQ5JRC9 791 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms