RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 NPLOC4Q8TAT6 608 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 GTF3C2Q8WUA4 911 aaPredicted RBP12.09□□□□□ -0.47
LBR-207ENST00000487054 STRBPQ96SI9 672 aaKnown RBP12.09□□□□□ -0.47
LBR-207ENST00000487054 APBA2Q99767 749 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 EPB41L4AQ9HCS5 686 aaPredicted RBP12.09□□□□□ -0.47
LBR-207ENST00000487054 LAMA3Q16787 3333 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
LBR-207ENST00000487054 ZNFX1Q9P2E3 1918 aaKnown RBP12.08□□□□□ -0.48
LBR-207ENST00000487054 GSG1L2A8MUP6 293 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 EEF2P13639 858 aaKnown RBP12.08□□□□□ -0.48
LBR-207ENST00000487054 PTPREP23469 700 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 PDE4AP27815 886 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 ATP2B2Q01814 1243 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 TTC22Q5TAA0 569 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 ATG4CQ96DT6 458 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 SEC62Q99442 399 aaKnown RBP12.08□□□□□ -0.48
LBR-207ENST00000487054 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.08□□□□□ -0.48
LBR-207ENST00000487054 MOV10L1Q9BXT6 1211 aaKnown RBP12.08□□□□□ -0.48
LBR-207ENST00000487054 PRO3102Q9H379 93 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 CWC22Q9HCG8 908 aaKnown RBP12.08□□□□□ -0.48
LBR-207ENST00000487054 FBXO28Q9NVF7 368 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 TMX2Q9Y320 296 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 PFASO15067 1338 aa12.08□□□□□ -0.48
LBR-207ENST00000487054 MYH4Q9Y623 1939 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 LAMA4Q16363 1823 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 TRIM6-TRIM34B2RNG4 842 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 EVI5O60447 810 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 CYP2C19P33261 490 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 MFAP1P55081 439 aaKnown RBP12.07□□□□□ -0.48
LBR-207ENST00000487054 GRB14Q14449 540 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 COG2Q14746 738 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 GIMAP6Q6P9H5 292 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 NECAB2Q7Z6G3 386 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 C7orf61Q8IZ16 206 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 TRPV1Q8NER1 839 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 DDRGK1Q96HY6 314 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 VCPKMTQ9H867 229 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 HELLSQ9NRZ9 838 aa12.07□□□□□ -0.48
LBR-207ENST00000487054 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 MINDY4BA8MYZ0 360 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 GPAA1O43292 621 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 FLOT1O75955 427 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 ERCC3P19447 782 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 RASA1P20936 1047 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 CCNA1P78396 465 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 ZMYM1Q5SVZ6 1142 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
LBR-207ENST00000487054 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 SPATC1LQ9H0A9 340 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 C11orf49Q9H6J7 331 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 ARHGEF10LQ9HCE6 1279 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 ARPP21Q9UBL0 812 aaPredicted RBP12.06□□□□□ -0.48
LBR-207ENST00000487054 ZMYND8Q9ULU4 1186 aaPredicted RBP12.06□□□□□ -0.48
LBR-207ENST00000487054 PLXNA1Q9UIW2 1896 aa12.06□□□□□ -0.48
LBR-207ENST00000487054 COBLO75128 1261 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 PRDM1O75626 825 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 IGHA2P01877 340 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 SYN1P17600 705 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 ADORA2AP29274 412 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 PLS1Q14651 629 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 AMOTL1Q8IY63 956 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 RILPL2Q969X0 211 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 CCDC17Q96LX7 622 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 HOXC10Q9NYD6 342 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 NR2E3Q9Y5X4 410 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 RAD50Q92878 1312 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 ROBO3Q96MS0 1386 aa12.05□□□□□ -0.48
LBR-207ENST00000487054 WDR46O15213 610 aaKnown RBP12.04□□□□□ -0.48
LBR-207ENST00000487054 RAD21O60216 631 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 HOXC6P09630 235 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 COL6A1P12109 1028 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 SBK1Q52WX2 424 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 NCAPG2Q86XI2 1143 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 TRMT44Q8IYL2 757 aaKnown RBP12.04□□□□□ -0.48
LBR-207ENST00000487054 LPAR1Q92633 364 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
LBR-207ENST00000487054 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
LBR-207ENST00000487054 FOXP2O15409 715 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
LBR-207ENST00000487054 SDSP20132 328 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 CNGA1P29973 690 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 TDO2P48775 406 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 LRRC26Q2I0M4 334 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 MCMDC2Q4G0Z9 681 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 PRAMEF19Q5SWL8 479 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 MFSD14CQ5VZR4 134 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 CCDC129Q6ZRS4 1044 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 DPP9Q86TI2 863 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 IFNL3Q8IZI9 196 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 RUFY2Q8WXA3 655 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 MS4A3Q96HJ5 214 aa12.03□□□□□ -0.48
LBR-207ENST00000487054 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms