RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 NRBP1Q9UHY1 535 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 PFASO15067 1338 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 TTC41PQ6P2S7 1318 aa16.43■□□□□ 0.22
SCAF4-206ENST00000485790 KBTBD13C9JR72 458 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 F5H6K3 240 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 ZBED4O75132 1171 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 MYCNP04198 464 aaPredicted RBP16.42■□□□□ 0.22
SCAF4-206ENST00000485790 KLRC3Q07444 240 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 LRRC26Q2I0M4 334 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 RIOX2Q8IUF8 465 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 CLEC10AQ8IUN9 316 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 PRPF38AQ8NAV1 312 aaKnown RBP16.42■□□□□ 0.22
SCAF4-206ENST00000485790 PPP1R9AQ9ULJ8 1098 aa16.42■□□□□ 0.22
SCAF4-206ENST00000485790 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
SCAF4-206ENST00000485790 TRIOBPQ9H2D6 2365 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 SIPA1L1O43166 1804 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 SMIM22K7EJ46 135 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 GPAA1O43292 621 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 IGHA2P01877 340 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 CYBAP13498 195 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 RASA1P20936 1047 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 PDE4BQ07343 736 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 GPR153Q6NV75 609 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 DDX11Q96FC9 970 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 MAML3Q96JK9 1138 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 SLF1Q9BQI6 1058 aa16.41■□□□□ 0.22
SCAF4-206ENST00000485790 ATAD5Q96QE3 1844 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 ATN1P54259 1190 aaPredicted RBP16.4■□□□□ 0.22
SCAF4-206ENST00000485790 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 GJC2Q5T442 439 aaPredicted RBP16.4■□□□□ 0.22
SCAF4-206ENST00000485790 IFNL3Q8IZI9 196 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 TRPV1Q8NER1 839 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 MKL1Q969V6 931 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.4■□□□□ 0.22
SCAF4-206ENST00000485790 FBXO28Q9NVF7 368 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
SCAF4-206ENST00000485790 RANBP2P49792 3224 aaKnown RBP16.39■□□□□ 0.21
SCAF4-206ENST00000485790 LRIT3Q3SXY7 679 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 PRAMEF19Q5SWL8 479 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 TINF2Q9BSI4 451 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 TEX13BQ9BXU2 312 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 CNPY2Q9Y2B0 182 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 MYH1P12882 1939 aa16.39■□□□□ 0.21
SCAF4-206ENST00000485790 TTLL1O95922 423 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 RARBP10826 455 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 SLC4A3P48751 1232 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 SLC39A5Q6ZMH5 540 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 RNF180Q86T96 592 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 NAPBQ9H115 298 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 FEM1BQ9UK73 627 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 DOCK3Q8IZD9 2030 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 FOCADQ5VW36 1801 aa16.38■□□□□ 0.21
SCAF4-206ENST00000485790 PGK2P07205 417 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 FDX1P10109 184 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 MDM2Q00987 491 aaPredicted RBP16.37■□□□□ 0.21
SCAF4-206ENST00000485790 ZNF792Q3KQV3 632 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 ANO1Q5XXA6 986 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 SNRNP48Q6IEG0 339 aaKnown RBP16.37■□□□□ 0.21
SCAF4-206ENST00000485790 MSL3Q8N5Y2 521 aaKnown RBP16.37■□□□□ 0.21
SCAF4-206ENST00000485790 LRCH3Q96II8 777 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
SCAF4-206ENST00000485790 ATP11BQ9Y2G3 1177 aa16.37■□□□□ 0.21
SCAF4-206ENST00000485790 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
SCAF4-206ENST00000485790 M0R2C6 588 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 SOX1O00570 391 aaPredicted RBP16.36■□□□□ 0.21
SCAF4-206ENST00000485790 PRDM1O75626 825 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 NDUFB10O96000 172 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 MX1P20591 662 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 ADCYAP1R1P41586 468 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 RTP1P59025 263 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 TFAP4Q01664 338 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 ANKRD45Q5TZF3 282 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 CHURC1Q8WUH1 139 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 KIFC2Q96AC6 838 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 NUP88Q99567 741 aaPredicted RBP16.36■□□□□ 0.21
SCAF4-206ENST00000485790 XPNPEP3Q9NQH7 507 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 FBXO40Q9UH90 709 aa16.36■□□□□ 0.21
SCAF4-206ENST00000485790 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 LRRC41Q15345 812 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 ANKRD35Q8N283 1001 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 DEFB123Q8N688 67 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 GMCL1P1Q8NEA9 526 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 CEP95Q96GE4 821 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 FAM184BQ9ULE4 1060 aa16.35■□□□□ 0.21
SCAF4-206ENST00000485790 ISY1Q9ULR0 285 aaKnown RBP16.35■□□□□ 0.21
SCAF4-206ENST00000485790 CDK5RAP2Q96SN8 1893 aa16.34■□□□□ 0.21
SCAF4-206ENST00000485790 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms