RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ZNF444Q8N0Y2 327 aaPredicted RBP11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 SOCS4Q8WXH5 440 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 UNC93B1Q9H1C4 597 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 HELLSQ9NRZ9 838 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 BTBD7Q9P203 1132 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
HLA-DQA1-206ENST00000482745 WDR46O15213 610 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 FOXP2O15409 715 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SLC3A2P08195 630 aaKnown RBP11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TERF1P54274 439 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PDE4BQ07343 736 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 LBX2Q6XYB7 198 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NUDT12Q9BQG2 462 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PLEKHH3Q7Z736 793 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 OSBPL3Q9H4L5 887 aa11.89□□□□□ -0.51
HLA-DQA1-206ENST00000482745 COL11A1P12107 1806 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HMGCRP04035 888 aa11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CTDSPL2Q05D32 466 aa11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 FAM47AQ5JRC9 791 aa11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ATG4CQ96DT6 458 aa11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HOXC10Q9NYD6 342 aa11.88□□□□□ -0.51
HLA-DQA1-206ENST00000482745 GJB1P08034 283 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TSPY3P0CV98 308 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TSPY8P0CW00 308 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PLS1Q14651 629 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ZNF589Q86UQ0 364 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NKX2-3Q8TAU0 364 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TRIB2Q92519 343 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SHISA4Q96DD7 197 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CEP95Q96GE4 821 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MAP7D2Q96T17 732 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 FBXO28Q9NVF7 368 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NYAP2Q9P242 653 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CLIP2Q9UDT6 1046 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 IVNS1ABPQ9Y6Y0 642 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 DSG3P32926 999 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 RGS2P41220 211 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TRIM32Q13049 653 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SKOR2Q2VWA4 1001 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 FAM83BQ5T0W9 1011 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NUP88Q99567 741 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SPATC1LQ9H0A9 340 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PLIN4Q96Q06 1357 aa11.87□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CCDC171Q6TFL3 1326 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 IGKV6D-41A0A0C4DH26 115 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ZKSCAN1P17029 563 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SDSP20132 328 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 GJA8P48165 433 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TFAP4Q01664 338 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MORN1Q5T089 497 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TICAM2Q86XR7 235 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MB21D1Q8N884 522 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 U2AF1L4Q8WU68 220 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 DEFB118Q96PH6 123 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 APBA2Q99767 749 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MOV10L1Q9BXT6 1211 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MTMR4Q9NYA4 1195 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 F5H6K3 240 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NDUFB10O96000 172 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HSPD1P10809 573 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 KLRC3Q07444 240 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MAP2K5Q13163 448 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CCL14Q16627 93 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 LRRC47Q8N1G4 583 aaKnown RBP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NEDD1Q8NHV4 660 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 USP6NLQ92738 828 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 INCENPQ9NQS7 918 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TOMM22Q9NS69 142 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 DIAPH3Q9NSV4 1193 aa11.86□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TSPY2A6NKD2 308 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TTLL1O95922 423 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 FGAP02671 866 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 XRCC5P13010 732 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PTPREP23469 700 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CWC27Q6UX04 472 aaKnown RBP11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 KIAA1211Q6ZU35 1233 aa11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PAK6Q9NQU5 681 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.85□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SLC15A5A6NIM6 579 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 SGPL1O95470 568 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ERCC3P19447 782 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 MFAP1P55081 439 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 GRB14Q14449 540 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ALX1Q15699 326 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 NCAPG2Q86XI2 1143 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HSCBQ8IWL3 235 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 TRMT44Q8IYL2 757 aaKnown RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 ANAPC4Q9UJX5 808 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 PPP1R9AQ9ULJ8 1098 aa11.84□□□□□ -0.51
HLA-DQA1-206ENST00000482745 CIZ1Q9ULV3 898 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms