RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 PPP4R3BQ5MIZ7 849 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 CTR9Q6PD62 1173 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 CRACR2BQ8N4Y2 399 aaPredicted RBP10.57□□□□□ -0.72
DDX56-211ENST00000479602 LSG1Q9H089 658 aaKnown RBP10.57□□□□□ -0.72
DDX56-211ENST00000479602 IL25Q9H293 177 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 FLRT1Q9NZU1 646 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 BTBD7Q9P203 1132 aa10.57□□□□□ -0.72
DDX56-211ENST00000479602 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
DDX56-211ENST00000479602 U3KPZ7 1027 aaPredicted RBP10.57□□□□□ -0.72
DDX56-211ENST00000479602 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 SLC15A5A6NIM6 579 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 SPDYE16A6NNV3 312 aaPredicted RBP10.56□□□□□ -0.72
DDX56-211ENST00000479602 FGAP02671 866 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 PTPREP23469 700 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 CCND3P30281 292 aaPredicted RBP10.56□□□□□ -0.72
DDX56-211ENST00000479602 USP14P54578 494 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 MAP2K5Q13163 448 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 GRB14Q14449 540 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 ABCB5Q2M3G0 1257 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 LRIT3Q3SXY7 679 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 KIAA1755Q5JYT7 1200 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 SDR42E1Q8WUS8 393 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 NAPBQ9H115 298 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 RNF41Q9H4P4 317 aaPredicted RBP10.56□□□□□ -0.72
DDX56-211ENST00000479602 C11orf49Q9H6J7 331 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 MCM9Q9NXL9 1143 aa10.56□□□□□ -0.72
DDX56-211ENST00000479602 USP17L12C9JPN9 530 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 USP17L21D6R901 530 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 PRKAB2O43741 272 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 SLC3A2P08195 630 aaKnown RBP10.55□□□□□ -0.72
DDX56-211ENST00000479602 RGS2P41220 211 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 PPARAQ07869 468 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 NECTIN1Q15223 517 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 SLFNL1Q499Z3 407 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 VPS53Q5VIR6 699 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 APBA2Q99767 749 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 ADAMTS5Q9UNA0 930 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 WDR19Q8NEZ3 1342 aa10.55□□□□□ -0.72
DDX56-211ENST00000479602 ALPK3Q96L96 1907 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 SMIM22K7EJ46 135 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 TDO2P48775 406 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 ANAPC15P60006 121 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 PDE4BQ07343 736 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 COG2Q14746 738 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 SEPT2Q15019 361 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 IMMTQ16891 758 aaKnown RBP10.54□□□□□ -0.72
DDX56-211ENST00000479602 C8orf34Q49A92 452 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 RNF20Q5VTR2 975 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 KIAA1211Q6ZU35 1233 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 FBXL16Q8N461 479 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 TRPV1Q8NER1 839 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 LRCH3Q96II8 777 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 TRIM34Q9BYJ4 488 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 CNNM2Q9H8M5 875 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 HOXC10Q9NYD6 342 aa10.54□□□□□ -0.72
DDX56-211ENST00000479602 STRNO43815 780 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 POLR3DP05423 398 aaPredicted RBP10.53□□□□□ -0.72
DDX56-211ENST00000479602 ZKSCAN1P17029 563 aaPredicted RBP10.53□□□□□ -0.72
DDX56-211ENST00000479602 DSG3P32926 999 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 HSPA4P34932 840 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 CCNA1P78396 465 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 RAB3GAP1Q15042 981 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 LRRC26Q2I0M4 334 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 CCDC178Q5BJE1 867 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 AKNAD1Q5T1N1 836 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 CCDC129Q6ZRS4 1044 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 SHCBP1Q8NEM2 672 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 PAGR1Q9BTK6 254 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 MOV10L1Q9BXT6 1211 aaKnown RBP10.53□□□□□ -0.72
DDX56-211ENST00000479602 RPAP3Q9H6T3 665 aaPredicted RBP10.53□□□□□ -0.72
DDX56-211ENST00000479602 CABP5Q9NP86 173 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 TMX2Q9Y320 296 aa10.53□□□□□ -0.72
DDX56-211ENST00000479602 VCANP13611 3396 aa10.52□□□□□ -0.72
DDX56-211ENST00000479602 TTC28Q96AY4 2481 aa10.52□□□□□ -0.72
DDX56-211ENST00000479602 IGKV6D-41A0A0C4DH26 115 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 COBLO75128 1261 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 CYP21A2P08686 494 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 CYP2D6P10635 497 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 CYBAP13498 195 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 RASA1P20936 1047 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 MAGEA10P43363 369 aaPredicted RBP10.52□□□□□ -0.73
DDX56-211ENST00000479602 CDK8P49336 464 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 KRT32Q14532 448 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 OLFML2BQ68BL8 750 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 TMEM179Q6ZVK1 233 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 LPAR1Q92633 364 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDX56-211ENST00000479602 BCL11AQ9H165 835 aa10.52□□□□□ -0.73
DDX56-211ENST00000479602 ZMYND8Q9ULU4 1186 aaPredicted RBP10.52□□□□□ -0.73
DDX56-211ENST00000479602 UNC80Q8N2C7 3258 aa10.51□□□□□ -0.73
DDX56-211ENST00000479602 RLFQ13129 1914 aa10.51□□□□□ -0.73
DDX56-211ENST00000479602 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
DDX56-211ENST00000479602 ZNF213O14771 459 aa10.51□□□□□ -0.73
DDX56-211ENST00000479602 HMGB1P09429 215 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms