RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ABCB5Q2M3G0 1257 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 OVOS2Q6IE36 1432 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 EEF2KMTQ96G04 330 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 IFT74Q96LB3 600 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 FAM207AQ9NSI2 230 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■■■■ 42.6
NPHP4-208ENST00000478423 ALAS1P13196 640 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 ADKP55263 362 aaKnown RBP15.84■□□□□ 0.13
NPHP4-208ENST00000478423 PLCB3Q01970 1234 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 VWA3BQ502W6 1294 aa15.84■□□□□ 0.13
NPHP4-208ENST00000478423 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.13
NPHP4-208ENST00000478423 PRDX5P30044 214 aa15.83■□□□□ 0.13
NPHP4-208ENST00000478423 FMNL3Q8IVF7 1028 aa15.83■□□□□ 0.13
NPHP4-208ENST00000478423 CELF1Q92879 486 aaKnown RBP15.83■□□□□ 0.13
NPHP4-208ENST00000478423 STK24Q9Y6E0 443 aa15.83■□□□□ 0.13
NPHP4-208ENST00000478423 CPS1P31327 1500 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 FSD2A1L4K1 749 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 TUBB4BP68371 445 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 GPATCH4Q5T3I0 446 aaKnown RBP15.83■□□□□ 0.12
NPHP4-208ENST00000478423 SPICE1Q8N0Z3 855 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 TRIML1Q8N9V2 468 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 CSRNP1Q96S65 589 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 SLF1Q9BQI6 1058 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.12
NPHP4-208ENST00000478423 MMP10P09238 476 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 MAGEA1P43355 309 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 LONRF3Q496Y0 759 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 SLC9C1Q4G0N8 1177 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 FAM107BQ9H098 131 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 CSRNP2Q9H175 543 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 GINS2Q9Y248 185 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 ATP6V0A2Q9Y487 856 aa15.83■□□□□ 0.12
NPHP4-208ENST00000478423 NRKQ7Z2Y5 1582 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 NLRC4Q9NPP4 1024 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 CEP83Q9Y592 693 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 LAMC1P11047 1609 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 NOP56O00567 594 aaKnown RBP15.82■□□□□ 0.12
NPHP4-208ENST00000478423 GPBP1Q86WP2 473 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 PTPRUQ92729 1446 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 A0A087WWV3 80 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 RXRBP28702 533 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 VAV2P52735 878 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 PPP2R3AQ06190 1150 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
NPHP4-208ENST00000478423 NAPGQ99747 312 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-208ENST00000478423 CARD6Q9BX69 1037 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 IVNS1ABPQ9Y6Y0 642 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
NPHP4-208ENST00000478423 GTPBP6O43824 516 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-208ENST00000478423 PPP6R2O75170 966 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 GJB4Q9NTQ9 266 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 PCDHB13Q9Y5F0 798 aa15.82■□□□□ 0.12
NPHP4-208ENST00000478423 TNFAIP3P21580 790 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 TOB2Q14106 344 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-208ENST00000478423 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
NPHP4-208ENST00000478423 TSGA10Q9BZW7 698 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 MMP1P03956 469 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 LONP1P36776 959 aaKnown RBP15.81■□□□□ 0.12
NPHP4-208ENST00000478423 TRAPPC10P48553 1259 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 RESTQ13127 1097 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 ZNF772Q68DY9 489 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-208ENST00000478423 CC2D2BQ6DHV5 1058 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 NLRX1Q86UT6 975 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 IFT81Q8WYA0 676 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 KDM3AQ9Y4C1 1321 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 KRT5P13647 590 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 FOXO4P98177 505 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 WDR44Q5JSH3 913 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 USP17L2Q6R6M4 530 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 MYOCDQ8IZQ8 938 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 RDH13Q8NBN7 331 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 AMNQ9BXJ7 453 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 DDX25Q9UHL0 483 aaKnown RBP15.81■□□□□ 0.12
NPHP4-208ENST00000478423 COL15A1P39059 1388 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 KIDINS220Q9ULH0 1771 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 DLC1Q96QB1 1528 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
NPHP4-208ENST00000478423 TTLL1O95922 423 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 IRX3P78415 501 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-208ENST00000478423 BBXQ8WY36 941 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-208ENST00000478423 JAKMIP2Q96AA8 810 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 MRFAP1L1Q96HT8 127 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 RASAL2Q9UJF2 1139 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 TUBBP07437 444 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 DPCR1Q3MIW9 517 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 RABL6Q3YEC7 729 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-208ENST00000478423 ASPRV1Q53RT3 343 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 CCDC50Q8IVM0 306 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 EXOC7Q9UPT5 735 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 MRPL11Q9Y3B7 192 aaKnown RBP15.8■□□□□ 0.12
NPHP4-208ENST00000478423 TESPA1A2RU30 521 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-208ENST00000478423 USP17L3A6NCW0 530 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 USP17L4A6NCW7 530 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 MCTP2Q6DN12 878 aa15.8■□□□□ 0.12
NPHP4-208ENST00000478423 USP17L1Q7RTZ2 530 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms