RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
MRPL55-228ENST00000476267 ZSCAN25Q6NSZ9 544 aa15.77■□□□□ 0.12
MRPL55-228ENST00000476267 NCAPG2Q86XI2 1143 aa15.77■□□□□ 0.12
MRPL55-228ENST00000476267 STRBPQ96SI9 672 aaKnown RBP15.77■□□□□ 0.12
MRPL55-228ENST00000476267 FBXO28Q9NVF7 368 aa15.77■□□□□ 0.12
MRPL55-228ENST00000476267 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.12
MRPL55-228ENST00000476267 ZNF214Q9UL59 606 aaPredicted RBP15.77■□□□□ 0.12
MRPL55-228ENST00000476267 GSG1L2A8MUP6 293 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 SLC25A27O95847 323 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 RASA1P20936 1047 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 PLS1Q14651 629 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 GJC2Q5T442 439 aaPredicted RBP15.76■□□□□ 0.11
MRPL55-228ENST00000476267 Q7L0L9 218 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 RIOX2Q8IUF8 465 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 AMOTL1Q8IY63 956 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 ECHDC1Q9NTX5 307 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
MRPL55-228ENST00000476267 MYH4Q9Y623 1939 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 VWA5AO00534 786 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 ATN1P54259 1190 aaPredicted RBP15.75■□□□□ 0.11
MRPL55-228ENST00000476267 RTP1P59025 263 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 PRAMEF19Q5SWL8 479 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 ANO1Q5XXA6 986 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 GIMAP6Q6P9H5 292 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 DEFB123Q8N688 67 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 KBTBD3Q8NAB2 608 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 ARRDC4Q8NCT1 418 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 OSBP2Q969R2 916 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 EPB41L4AQ9HCS5 686 aaPredicted RBP15.75■□□□□ 0.11
MRPL55-228ENST00000476267 MTMR10Q9NXD2 777 aa15.75■□□□□ 0.11
MRPL55-228ENST00000476267 IGKV6D-41A0A0C4DH26 115 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 FCER1AP12319 257 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 ZNF792Q3KQV3 632 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 C1orf53Q5VUE5 145 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 SLC39A5Q6ZMH5 540 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 DCTPP1Q9H773 170 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 GOPCQ9HD26 462 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 SLC5A4Q9NY91 659 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 NRBP1Q9UHY1 535 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 DIS3Q9Y2L1 958 aaKnown RBP15.74■□□□□ 0.11
MRPL55-228ENST00000476267 UNC80Q8N2C7 3258 aa15.74■□□□□ 0.11
MRPL55-228ENST00000476267 EYSQ5T1H1 3165 aa15.73■□□□□ 0.11
MRPL55-228ENST00000476267 LRRC41Q15345 812 aa15.73■□□□□ 0.11
MRPL55-228ENST00000476267 FAM83BQ5T0W9 1011 aa15.73■□□□□ 0.11
MRPL55-228ENST00000476267 APPBP2Q92624 585 aa15.73■□□□□ 0.11
MRPL55-228ENST00000476267 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
MRPL55-228ENST00000476267 KBTBD13C9JR72 458 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 POTEB2H3BUK9 544 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 PGK2P07205 417 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 ZNF865P0CJ78 1059 aaPredicted RBP15.72■□□□□ 0.11
MRPL55-228ENST00000476267 STAT3P40763 770 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 TSHZ3Q63HK5 1081 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 MMP19Q99542 508 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 TINF2Q9BSI4 451 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 STXBP5LQ9Y2K9 1186 aa15.72■□□□□ 0.11
MRPL55-228ENST00000476267 RNF113AO15541 343 aaKnown RBP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 ADCYAP1R1P41586 468 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 TRIM60Q495X7 471 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 FAM109BQ6ICB4 259 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 SLC17A8Q8NDX2 589 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 NUP88Q99567 741 aaPredicted RBP15.71■□□□□ 0.11
MRPL55-228ENST00000476267 PDLIM7Q9NR12 457 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 PHF24Q9UPV7 400 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 ATP11BQ9Y2G3 1177 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
MRPL55-228ENST00000476267 CDH23Q9H251 3354 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 DNAJC25-GNG10A0A024R161 153 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 F5H6K3 240 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 M0R2C6 588 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 ATP2A1O14983 1001 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 GPAA1O43292 621 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 NDUFB10O96000 172 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 COPB2P35606 906 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 KLRC3Q07444 240 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 KCTD2Q14681 263 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 MKL1Q969V6 931 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 LBHD1Q9BQE6 289 aaPredicted RBP15.7■□□□□ 0.1
MRPL55-228ENST00000476267 SLF1Q9BQI6 1058 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 RIPK3Q9Y572 518 aa15.7■□□□□ 0.1
MRPL55-228ENST00000476267 ADAMTS4O75173 837 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 ZFYP08048 801 aaPredicted RBP15.69■□□□□ 0.1
MRPL55-228ENST00000476267 MAMDC4Q6UXC1 1216 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 SH3RF1Q7Z6J0 888 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 PI4K2BQ8TCG2 481 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 TEX13BQ9BXU2 312 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 XPNPEP3Q9NQH7 507 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 SYNPO2Q9UMS6 1093 aa15.69■□□□□ 0.1
MRPL55-228ENST00000476267 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 TRIM43BA6NCK2 446 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 MINDY4BA8MYZ0 360 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 GNAT2P19087 354 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 SNRNP48Q6IEG0 339 aaKnown RBP15.68■□□□□ 0.1
MRPL55-228ENST00000476267 STK11IPQ8N1F8 1099 aa15.68■□□□□ 0.1
MRPL55-228ENST00000476267 MSL3Q8N5Y2 521 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms