RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 GSDMDP57764 484 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 GOLGA8FQ08AF8 430 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 GOLGA8DPQ0D2H9 430 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 SPATA20Q8TB22 786 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 FERMT2Q96AC1 680 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 PAGE5Q96GU1 130 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 GRM4Q14833 912 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 BLIDQ8IZY5 108 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 EYA3Q99504 573 aa18.96■□□□□ 0.63
TVP23B-202ENST00000476139 CTIFO43310 598 aaKnown RBP18.95■□□□□ 0.62
TVP23B-202ENST00000476139 SLFN14P0C7P3 912 aa18.95■□□□□ 0.62
TVP23B-202ENST00000476139 NCBP1Q09161 790 aaKnown RBP18.95■□□□□ 0.62
TVP23B-202ENST00000476139 MXD3Q9BW11 206 aa18.95■□□□□ 0.62
TVP23B-202ENST00000476139 NFE2L3Q9Y4A8 694 aa18.95■□□□□ 0.62
TVP23B-202ENST00000476139 TCP11L1Q9NUJ3 509 aa18.95■□□□□ 0.62
TVP23B-202ENST00000476139 WWC2Q6AWC2 1192 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 KANK3Q6NY19 840 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 HEATR3Q7Z4Q2 680 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 SMYD4Q8IYR2 804 aaPredicted RBP18.94■□□□□ 0.62
TVP23B-202ENST00000476139 CRAMP1Q96RY5 1269 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 INTS13Q9NVM9 706 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 C16orf86Q6ZW13 317 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 CCAR2Q8N163 923 aaKnown RBP18.94■□□□□ 0.62
TVP23B-202ENST00000476139 MLKLQ8NB16 471 aa18.94■□□□□ 0.62
TVP23B-202ENST00000476139 SAMSN1Q9NSI8 373 aaKnown RBP18.94■□□□□ 0.62
TVP23B-202ENST00000476139 SFPQP23246 707 aaKnown RBP eCLIP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 PICALMQ13492 652 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 PCDHA4Q9UN74 947 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 PALM3A6NDB9 673 aaPredicted RBP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 KLRF2D3W0D1 207 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 BMP15O95972 392 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 SH3RF1Q7Z6J0 888 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 MORC2Q9Y6X9 1032 aaPredicted RBP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 PPEF1O14829 653 aaPredicted RBP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
TVP23B-202ENST00000476139 KLHL10Q6JEL2 608 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 CEP95Q96GE4 821 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 BLZF1Q9H2G9 400 aa18.93■□□□□ 0.62
TVP23B-202ENST00000476139 E4F1Q66K89 784 aaPredicted RBP18.92■□□□□ 0.62
TVP23B-202ENST00000476139 C4orf32Q8N8J7 132 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 FAM163AQ96GL9 167 aaPredicted RBP18.92■□□□□ 0.62
TVP23B-202ENST00000476139 DAGLAQ9Y4D2 1042 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 M0R2N6 131 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 CDK11BP21127 795 aaKnown RBP18.92■□□□□ 0.62
TVP23B-202ENST00000476139 CALML3P27482 149 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 ANKRD7Q92527 254 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 VAT1LQ9HCJ6 419 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 PCDHA6Q9UN73 950 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 PAXBP1Q9Y5B6 917 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 PCDHA8Q9Y5H6 950 aa18.92■□□□□ 0.62
TVP23B-202ENST00000476139 IGSF3O75054 1194 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 COBLO75128 1261 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 TRAPPC10P48553 1259 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 STX17P56962 302 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 DPYDQ12882 1025 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 DOK7Q18PE1 504 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 HOMER1Q86YM7 354 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 SP8Q8IXZ3 490 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 CERS5Q8N5B7 392 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 ENOX1Q8TC92 643 aaKnown RBP18.91■□□□□ 0.62
TVP23B-202ENST00000476139 MTRQ99707 1265 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 ZNF18P17022 549 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 INF2Q27J81 1249 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 TRIML1Q8N9V2 468 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 SH3GLB2Q9NR46 395 aa18.91■□□□□ 0.62
TVP23B-202ENST00000476139 SNED1Q8TER0 1413 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 GNAQP50148 359 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 NYAP1Q6ZVC0 841 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 COL23A1Q86Y22 540 aaPredicted RBP18.9■□□□□ 0.62
TVP23B-202ENST00000476139 NEDD1Q8NHV4 660 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 ZNF287Q9HBT7 754 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 BARHL2Q9NY43 387 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 ZNF215Q9UL58 517 aaPredicted RBP18.9■□□□□ 0.62
TVP23B-202ENST00000476139 GAKO14976 1311 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 STXBP3O00186 592 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 PLCG2P16885 1265 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 E2F4Q16254 413 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 CCDC150Q8NCX0 1101 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 TBC1D22AQ8WUA7 517 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 ATP6V0A2Q9Y487 856 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 SRGNP10124 158 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 CCDC178Q5BJE1 867 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 TMEM60Q9H2L4 133 aa18.9■□□□□ 0.62
TVP23B-202ENST00000476139 CCDC194A0A1B0GVG4 234 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 CBFA2T2O43439 604 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 SCNN1DP51172 638 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 PP2D1A8MPX8 630 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 SLURP2P0DP57 97 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 TOP1P11387 765 aaKnown RBP18.89■□□□□ 0.61
TVP23B-202ENST00000476139 EIF6P56537 245 aaKnown RBP18.89■□□□□ 0.61
TVP23B-202ENST00000476139 CLEC10AQ8IUN9 316 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
TVP23B-202ENST00000476139 DDX4Q9NQI0 724 aaKnown RBP18.89■□□□□ 0.61
TVP23B-202ENST00000476139 DACH1Q9UI36 760 aa18.89■□□□□ 0.61
TVP23B-202ENST00000476139 CUL4BQ13620 913 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms