RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 ATP11BQ9Y2G3 1177 aa21.48■■□□□ 1.03
PCGF3-209ENST00000475288 ZNFX1Q9P2E3 1918 aaKnown RBP21.47■■□□□ 1.03
PCGF3-209ENST00000475288 PRKAB2O43741 272 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 LRRC41Q15345 812 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 CLEC10AQ8IUN9 316 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 SPICE1Q8N0Z3 855 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 DDRGK1Q96HY6 314 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 GUCD1Q96NT3 240 aa21.47■■□□□ 1.03
PCGF3-209ENST00000475288 CHMP4BQ9H444 224 aaKnown RBP21.47■■□□□ 1.03
PCGF3-209ENST00000475288 COL11A1P12107 1806 aaPredicted RBP21.47■■□□□ 1.03
PCGF3-209ENST00000475288 USP17L12C9JPN9 530 aa21.46■■□□□ 1.03
PCGF3-209ENST00000475288 USP17L21D6R901 530 aa21.46■■□□□ 1.03
PCGF3-209ENST00000475288 PHF24Q9UPV7 400 aa21.46■■□□□ 1.03
PCGF3-209ENST00000475288 GREB1LQ9C091 1923 aaPredicted RBP21.45■■□□□ 1.02
PCGF3-209ENST00000475288 EYSQ5T1H1 3165 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 EEF2P13639 858 aaKnown RBP21.45■■□□□ 1.02
PCGF3-209ENST00000475288 TRIM60Q495X7 471 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 FAM47AQ5JRC9 791 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 PRAMEF19Q5SWL8 479 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 ANO1Q5XXA6 986 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 BOLA2Q9H3K6 86 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 PDLIM7Q9NR12 457 aa21.45■■□□□ 1.02
PCGF3-209ENST00000475288 PLXNA1Q9UIW2 1896 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 APBB1O00213 710 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 VWA5AO00534 786 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 ADCYAP1R1P41586 468 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 ZNF697Q5TEC3 545 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 ZSCAN25Q6NSZ9 544 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 MMP19Q99542 508 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 TINF2Q9BSI4 451 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 ZNF214Q9UL59 606 aaPredicted RBP21.44■■□□□ 1.02
PCGF3-209ENST00000475288 PPP1R9AQ9ULJ8 1098 aa21.44■■□□□ 1.02
PCGF3-209ENST00000475288 CYP2D7A0A087X1C5 515 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 RARBP10826 455 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 KCTD2Q14681 263 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 SHHQ15465 462 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 ZNF792Q3KQV3 632 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 SLFNL1Q499Z3 407 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 MSL3Q8N5Y2 521 aaKnown RBP21.43■■□□□ 1.02
PCGF3-209ENST00000475288 REPS2Q8NFH8 660 aa21.43■■□□□ 1.02
PCGF3-209ENST00000475288 ARPP21Q9UBL0 812 aaPredicted RBP21.43■■□□□ 1.02
PCGF3-209ENST00000475288 STAT3P40763 770 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 SMAD3P84022 425 aaKnown RBP21.42■■□□□ 1.02
PCGF3-209ENST00000475288 CTR9Q6PD62 1173 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 RNF180Q86T96 592 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 XPNPEP3Q9NQH7 507 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 PRDM5Q9NQX1 630 aaPredicted RBP21.42■■□□□ 1.02
PCGF3-209ENST00000475288 FBXO28Q9NVF7 368 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 TACC3Q9Y6A5 838 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 SLC4A4Q9Y6R1 1079 aa21.42■■□□□ 1.02
PCGF3-209ENST00000475288 SMIM22K7EJ46 135 aa21.41■■□□□ 1.02
PCGF3-209ENST00000475288 SBK1Q52WX2 424 aa21.41■■□□□ 1.02
PCGF3-209ENST00000475288 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.41■■□□□ 1.022e-6■■■■■ 29.9
PCGF3-209ENST00000475288 BADQ92934 168 aa21.41■■□□□ 1.02
PCGF3-209ENST00000475288 SMCHD1A6NHR9 2005 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 CDH23Q9H251 3354 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 TRIM43BA6NCK2 446 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 ZNF865P0CJ78 1059 aaPredicted RBP21.4■■□□□ 1.02
PCGF3-209ENST00000475288 AKR1A1P14550 325 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 C9orf50Q5SZB4 431 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 GIMAP6Q6P9H5 292 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 FERMT2Q96AC1 680 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 TRIM43Q96BQ3 446 aaPredicted RBP21.4■■□□□ 1.02
PCGF3-209ENST00000475288 TSEN34Q9BSV6 310 aaKnown RBP21.4■■□□□ 1.02
PCGF3-209ENST00000475288 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.4■■□□□ 1.02
PCGF3-209ENST00000475288 PUS7LQ9H0K6 701 aaKnown RBP21.4■■□□□ 1.02
PCGF3-209ENST00000475288 COG6Q9Y2V7 657 aa21.4■■□□□ 1.02
PCGF3-209ENST00000475288 KIAA0355O15063 1070 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 PGK2P07205 417 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 TLE2Q04725 743 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.39■■□□□ 1.016e-7■■■■□ 24.8
PCGF3-209ENST00000475288 SH3RF1Q7Z6J0 888 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 TEX13BQ9BXU2 312 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 NYAP2Q9P242 653 aa21.39■■□□□ 1.01
PCGF3-209ENST00000475288 SYNGAP1Q96PV0 1343 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 ATP2A1O14983 1001 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 MYCNP04198 464 aaPredicted RBP21.38■■□□□ 1.01
PCGF3-209ENST00000475288 CHGBP05060 677 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 CLTBP09497 229 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 FAM83BQ5T0W9 1011 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 SAMD1Q6SPF0 538 aaPredicted RBP21.38■■□□□ 1.01
PCGF3-209ENST00000475288 MIER1Q8N108 512 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 SLF1Q9BQI6 1058 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 SEMA6BQ9H3T3 888 aa21.38■■□□□ 1.01
PCGF3-209ENST00000475288 VCANP13611 3396 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 TMEM265A0A087WTH1 108 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 A0A1W2PQ45 241 aaPredicted RBP21.37■■□□□ 1.01
PCGF3-209ENST00000475288 A0A1W2PQY0 241 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 ADAMTS4O75173 837 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 MAMDC4Q6UXC1 1216 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 FAM161BQ96MY7 647 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 TOX2Q96NM4 488 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 STRBPQ96SI9 672 aaKnown RBP21.37■■□□□ 1.01
PCGF3-209ENST00000475288 COL25A1Q9BXS0 654 aaPredicted RBP21.37■■□□□ 1.01
PCGF3-209ENST00000475288 SYNPO2Q9UMS6 1093 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 CNPY2Q9Y2B0 182 aa21.37■■□□□ 1.01
PCGF3-209ENST00000475288 DNAJC25-GNG10A0A024R161 153 aa21.36■■□□□ 1.01
PCGF3-209ENST00000475288 PGK1P00558 417 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms