RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CLRN2A0PK11 232 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 PHF20L1A8MW92 1017 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TCP10L2B9ZVM9 353 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 H7C1D1 291 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 PPP1R37O75864 691 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 DEXIO95424 95 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TTLL1O95922 423 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 HSPA6P17066 643 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 RXRAP19793 462 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 KIF5BP33176 963 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TNNI2P48788 182 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 HIRAP54198 1017 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 RESTQ13127 1097 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TNFAIP1Q13829 316 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 RASA3Q14644 834 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 RRP1BQ14684 758 aaKnown RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 PKN1Q16512 942 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 KIF4BQ2VIQ3 1234 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 SLC4A8Q2Y0W8 1093 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 CERKLQ49MI3 558 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TMEM179Q6ZVK1 233 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 SRBD1Q8N5C6 995 aaKnown RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 FAM184AQ8NB25 1140 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 TMEM87AQ8NBN3 555 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 WNT2BQ93097 391 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 MYL10Q9BUA6 226 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 ZSCAN16Q9H4T2 348 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 KAT14Q9H8E8 782 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 KANSL2Q9H9L4 492 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 RBM27Q9P2N5 1060 aaKnown RBP7.69□□□□□ -1.18
ATG4A-207ENST00000474825 MAD2L2Q9UI95 211 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 PPP2R3BQ9Y5P8 575 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 GJA3Q9Y6H8 435 aa7.69□□□□□ -1.18
ATG4A-207ENST00000474825 DDX11L8A8MPP1 907 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 SLURP2P0DP57 97 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 PDHBP11177 359 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 PTMSP20962 102 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 JAG1P78504 1218 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 SSRP1Q08945 709 aaKnown RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 SLC35G1Q2M3R5 365 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 TBC1D10BQ4KMP7 808 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 ATL3Q6DD88 541 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 Q6ZNB5 142 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 SAMD7Q7Z3H4 446 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 RAB11FIP4Q86YS3 637 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 APOBEC3FQ8IUX4 373 aaKnown RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 ZSCAN29Q8IWY8 852 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 CTCFLQ8NI51 663 aaPredicted RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 TRPM4Q8TD43 1214 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 NUP133Q8WUM0 1156 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 WASF1Q92558 559 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 DDX11Q96FC9 970 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 SPZ1Q9BXG8 430 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 TMEM39BQ9GZU3 492 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 RRAGCQ9HB90 399 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 ADARB2Q9NS39 739 aaKnown RBP7.68□□□□□ -1.18
ATG4A-207ENST00000474825 HACL1Q9UJ83 578 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 ATP6V1DQ9Y5K8 247 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 CNTNAP5Q8WYK1 1306 aa7.68□□□□□ -1.18
ATG4A-207ENST00000474825 GOLGA8CPA6NN73 597 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 CYTH3O43739 400 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 DTNBO60941 627 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 DDNO94850 711 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 PLEKHA8P1O95397 391 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 U2AF2P26368 475 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 CAP2P40123 477 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 EPS15P42566 896 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 ABCB5Q2M3G0 1257 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 CCDC144CPQ8IYA2 1237 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 TRIM22Q8IYM9 498 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 STAG2Q8N3U4 1231 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 GMCL1P1Q8NEA9 526 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 ZC3H15Q8WU90 426 aaKnown RBP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 PHKBQ93100 1093 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 SHISA4Q96DD7 197 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 MTMR8Q96EF0 704 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 GMCL1Q96IK5 515 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 C8orf76Q96K31 380 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 ALG1Q9BT22 464 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 RIOX1Q9H6W3 641 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 VEZTQ9HBM0 779 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 NMRK2Q9NPI5 230 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 LMBRD1Q9NUN5 540 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 NAP1L2Q9ULW6 460 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 STX8Q9UNK0 236 aa7.67□□□□□ -1.18
ATG4A-207ENST00000474825 ASTN2O75129 1339 aaPredicted RBP7.67□□□□□ -1.18
ATG4A-207ENST00000474825 VPS37CA5D8V6 355 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-207ENST00000474825 GLTPD2A6NH11 291 aa7.66□□□□□ -1.18
ATG4A-207ENST00000474825 FAM196BA6NMK8 535 aa7.66□□□□□ -1.18
ATG4A-207ENST00000474825 KLRF2D3W0D1 207 aa7.66□□□□□ -1.18
ATG4A-207ENST00000474825 H3BQV1 296 aa7.66□□□□□ -1.18
ATG4A-207ENST00000474825 ITGBL1O95965 494 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-207ENST00000474825 EEF2P13639 858 aaKnown RBP7.66□□□□□ -1.18
ATG4A-207ENST00000474825 VEGFAP15692 232 aaPredicted RBP7.66□□□□□ -1.18
ATG4A-207ENST00000474825 APLP1P51693 650 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms