RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 KLRC3Q07444 240 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 IKQ13123 557 aaPredicted RBP17.54■□□□□ 0.4
SSR4-208ENST00000471880 IRF5Q13568 498 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 ALX1Q15699 326 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 NCAPG2Q86XI2 1143 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 NEDD1Q8NHV4 660 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
SSR4-208ENST00000471880 NDUFB10O96000 172 aa17.53■□□□□ 0.4
SSR4-208ENST00000471880 SHISA4Q96DD7 197 aa17.53■□□□□ 0.4
SSR4-208ENST00000471880 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
SSR4-208ENST00000471880 GJD2Q9UKL4 321 aa17.53■□□□□ 0.4
SSR4-208ENST00000471880 IGKV6D-41A0A0C4DH26 115 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 ZNF213O14771 459 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 NMT2O60551 498 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 NEFLP07196 543 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.4
SSR4-208ENST00000471880 RGS2P41220 211 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 LBX2Q6XYB7 198 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 MB21D1Q8N884 522 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 PXYLP1Q8TE99 480 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 MOV10L1Q9BXT6 1211 aaKnown RBP17.52■□□□□ 0.4
SSR4-208ENST00000471880 SPATC1LQ9H0A9 340 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 ALPK3Q96L96 1907 aa17.52■□□□□ 0.4
SSR4-208ENST00000471880 HMGCRP04035 888 aa17.51■□□□□ 0.39
SSR4-208ENST00000471880 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
SSR4-208ENST00000471880 KIFC2Q96AC6 838 aa17.51■□□□□ 0.39
SSR4-208ENST00000471880 ANAPC4Q9UJX5 808 aa17.51■□□□□ 0.39
SSR4-208ENST00000471880 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.51■□□□□ 0.39
SSR4-208ENST00000471880 FRMPD3Q5JV73 1810 aa17.51■□□□□ 0.39
SSR4-208ENST00000471880 ERCC3P19447 782 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 TRIM32Q13049 653 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 PPP4R3BQ5MIZ7 849 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 DPP9Q86TI2 863 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 RUFY2Q8WXA3 655 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 DEFB118Q96PH6 123 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 SLF1Q9BQI6 1058 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 RNF41Q9H4P4 317 aaPredicted RBP17.5■□□□□ 0.39
SSR4-208ENST00000471880 PPP1R9AQ9ULJ8 1098 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 TACC3Q9Y6A5 838 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 PLIN4Q96Q06 1357 aa17.5■□□□□ 0.39
SSR4-208ENST00000471880 ORC4O43929 436 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 PTPREP23469 700 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 MAP2K5Q13163 448 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 CCL14Q16627 93 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
SSR4-208ENST00000471880 CCDC96Q2M329 555 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 AKNAD1Q5T1N1 836 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
SSR4-208ENST00000471880 TBC1D10CQ8IV04 446 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 CPXCR1Q8N123 301 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 TRIB2Q92519 343 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 CCDC136Q96JN2 1154 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 APBA2Q99767 749 aa17.49■□□□□ 0.39
SSR4-208ENST00000471880 ZMYM6O95789 1325 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 SLC15A5A6NIM6 579 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 TMEM232C9JQI7 657 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 VWA5AO00534 786 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 ZBED4O75132 1171 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 TFRCP02786 760 aaKnown RBP17.48■□□□□ 0.39
SSR4-208ENST00000471880 BMP3P12645 472 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 MCCP23508 829 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 SLC1A4P43007 532 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 TMEM132BQ14DG7 1078 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 MORN1Q5T089 497 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.48■□□□□ 0.39
SSR4-208ENST00000471880 HMX1Q9NP08 348 aaPredicted RBP17.48■□□□□ 0.39
SSR4-208ENST00000471880 CTNNA3Q9UI47 895 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 LAMA4Q16363 1823 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 PLXNA1Q9UIW2 1896 aa17.48■□□□□ 0.39
SSR4-208ENST00000471880 SMCHD1A6NHR9 2005 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 GJB1P08034 283 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 PRKAR2AP13861 404 aaKnown RBP17.47■□□□□ 0.39
SSR4-208ENST00000471880 ADORA2AP29274 412 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 TRMT44Q8IYL2 757 aaKnown RBP17.47■□□□□ 0.39
SSR4-208ENST00000471880 PRPF38AQ8NAV1 312 aaKnown RBP17.47■□□□□ 0.39
SSR4-208ENST00000471880 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
SSR4-208ENST00000471880 ESR2Q92731 530 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 USP6NLQ92738 828 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 MKL1Q969V6 931 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 DSCC1Q9BVC3 393 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 MROH8Q9H579 483 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 IL17RBQ9NRM6 502 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 FEM1BQ9UK73 627 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 NEDD4P46934 1319 aa17.47■□□□□ 0.39
SSR4-208ENST00000471880 FCER1AP12319 257 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 XRCC5P13010 732 aaKnown RBP17.46■□□□□ 0.39
SSR4-208ENST00000471880 CHMLP26374 656 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 STAT3P40763 770 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 GRB14Q14449 540 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 MFSD14CQ5VZR4 134 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
SSR4-208ENST00000471880 KCTD1Q719H9 257 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 SHCBP1Q8NEM2 672 aa17.46■□□□□ 0.39
SSR4-208ENST00000471880 STAG1Q8WVM7 1258 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms