RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 OSBPL5Q9H0X9 879 aaPredicted RBP13.03□□□□□ -0.32
HPS1-208ENST00000467246 ZNF287Q9HBT7 754 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 GNAQP50148 359 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 FMR1Q06787 632 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■■■□ 22.7
HPS1-208ENST00000467246 PICALMQ13492 652 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 WWC2Q6AWC2 1192 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 KANK3Q6NY19 840 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 NEDD1Q8NHV4 660 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 C16orf45Q96MC5 204 aaPredicted RBP13.03□□□□□ -0.32
HPS1-208ENST00000467246 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 CDK5RAP2Q96SN8 1893 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 NEMFO60524 1076 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 SLFN14P0C7P3 912 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 CALML3P27482 149 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 TMC4Q7Z404 712 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 HEATR3Q7Z4Q2 680 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 CEP95Q96GE4 821 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 PRIMPOLQ96LW4 560 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 ZC3H12CQ9C0D7 883 aaKnown RBP13.03□□□□□ -0.32
HPS1-208ENST00000467246 COA1Q9GZY4 146 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
HPS1-208ENST00000467246 USP27XA6NNY8 438 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 APBA3O96018 575 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 SERPINC1P01008 464 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 PTPN21Q16825 1174 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 MYRIPQ8NFW9 859 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 AKT1S1Q96B36 256 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 PAGE5Q96GU1 130 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 MED15Q96RN5 788 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.32
HPS1-208ENST00000467246 LTBP1Q14766 1721 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 DDX60LQ5H9U9 1706 aaKnown RBP13.02□□□□□ -0.33
HPS1-208ENST00000467246 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 UBASH3AP57075 661 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 GSDMDP57764 484 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.33
HPS1-208ENST00000467246 MLKLQ8NB16 471 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 STAMQ92783 540 aa13.02□□□□□ -0.33
HPS1-208ENST00000467246 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 M0R2N6 131 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 MMP10P09238 476 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 NPR1P16066 1061 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 STXBP3O00186 592 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 CDC25AP30304 524 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 SCNN1DP51172 638 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 CFAP100Q494V2 611 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 C4orf32Q8N8J7 132 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 DDX4Q9NQI0 724 aaKnown RBP13.01□□□□□ -0.33
HPS1-208ENST00000467246 BARHL2Q9NY43 387 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
HPS1-208ENST00000467246 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 LRRC37AA6NMS7 1700 aa13.01□□□□□ -0.33
HPS1-208ENST00000467246 TPD52L1Q16890 204 aaPredicted RBP13□□□□□ -0.33
HPS1-208ENST00000467246 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
HPS1-208ENST00000467246 HOMER1Q86YM7 354 aa13□□□□□ -0.33
HPS1-208ENST00000467246 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
HPS1-208ENST00000467246 NFE2L3Q9Y4A8 694 aa13□□□□□ -0.33
HPS1-208ENST00000467246 TMEM232C9JQI7 657 aa13□□□□□ -0.33
HPS1-208ENST00000467246 PLSCR1O15162 318 aa13□□□□□ -0.33
HPS1-208ENST00000467246 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
HPS1-208ENST00000467246 VAT1LQ9HCJ6 419 aa13□□□□□ -0.33
HPS1-208ENST00000467246 CCDC194A0A1B0GVG4 234 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 TOP1P11387 765 aaKnown RBP12.99□□□□□ -0.33
HPS1-208ENST00000467246 DPYDQ12882 1025 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 E2F4Q16254 413 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 INF2Q27J81 1249 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 INTS13Q9NVM9 706 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 TRMT1Q9NXH9 659 aaKnown RBP12.99□□□□□ -0.33
HPS1-208ENST00000467246 USP17L5A8MUK1 530 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 DYNC1I1O14576 645 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 TNNT1P13805 278 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 ALDH1B1P30837 517 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 CLEC10AQ8IUN9 316 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 ENOX1Q8TC92 643 aaKnown RBP12.99□□□□□ -0.33
HPS1-208ENST00000467246 LZTS2Q9BRK4 669 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 SPZ1Q9BXG8 430 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 SAMSN1Q9NSI8 373 aaKnown RBP12.99□□□□□ -0.33
HPS1-208ENST00000467246 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 MYH1P12882 1939 aa12.99□□□□□ -0.33
HPS1-208ENST00000467246 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 ZNF18P17022 549 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 SFPQP23246 707 aaKnown RBP eCLIP12.98□□□□□ -0.33
HPS1-208ENST00000467246 PDE6BP35913 854 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 EIF6P56537 245 aaKnown RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 GABPAQ06546 454 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 SMYD4Q8IYR2 804 aaPredicted RBP12.98□□□□□ -0.33
HPS1-208ENST00000467246 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 CCDC34Q96HJ3 373 aa12.98□□□□□ -0.33
HPS1-208ENST00000467246 MTRQ99707 1265 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms