RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 IL17RBQ9NRM6 502 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 HOXC10Q9NYD6 342 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 GJD2Q9UKL4 321 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 NEDD4P46934 1319 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 HTTP42858 3142 aa12.06□□□□□ -0.48
CD40-204ENST00000466205 PLIN4Q96Q06 1357 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 PLXNB2O15031 1838 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 CHMLP26374 656 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 CCNA1P78396 465 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 IRF5Q13568 498 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 CCL14Q16627 93 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 MFSD6Q6ZSS7 791 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 TRIB2Q92519 343 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 KIFC2Q96AC6 838 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 CCDC136Q96JN2 1154 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 SPATC1LQ9H0A9 340 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 MYH4Q9Y623 1939 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 A0A0G2JMZ2 1700 aa12.05□□□□□ -0.48
CD40-204ENST00000466205 CENPFP49454 3210 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 RLFQ13129 1914 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 NEFLP07196 543 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 ERCC3P19447 782 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 MCCP23508 829 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 IKQ13123 557 aaPredicted RBP12.04□□□□□ -0.48
CD40-204ENST00000466205 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 TICAM2Q86XR7 235 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 MKL1Q969V6 931 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 DSCC1Q9BVC3 393 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 PPP1R9AQ9ULJ8 1098 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
CD40-204ENST00000466205 PARP14Q460N5 1801 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 VWA5AO00534 786 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 ORC4O43929 436 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 BMP3P12645 472 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 PTPREP23469 700 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 SNAP25P60880 206 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 PTH1RQ03431 593 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 IMMTQ16891 758 aaKnown RBP12.03□□□□□ -0.48
CD40-204ENST00000466205 MORN1Q5T089 497 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 KCTD1Q719H9 257 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 CPXCR1Q8N123 301 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 IVNS1ABPQ9Y6Y0 642 aa12.03□□□□□ -0.48
CD40-204ENST00000466205 FRMPD2Q68DX3 1309 aaPredicted RBP12.03□□□□□ -0.48
CD40-204ENST00000466205 COL11A1P12107 1806 aaPredicted RBP12.02□□□□□ -0.48
CD40-204ENST00000466205 BRCA2P51587 3418 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 B4E1Z4 1266 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 TMEM232C9JQI7 657 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 KDM4AO75164 1064 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 HMGCRP04035 888 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 FGRP09769 529 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
CD40-204ENST00000466205 RGS2P41220 211 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 SLC1A4P43007 532 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 MAP2K5Q13163 448 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 CCDC96Q2M329 555 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 MB21D1Q8N884 522 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 GMCL1P1Q8NEA9 526 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 NPLOC4Q8TAT6 608 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 RUFY2Q8WXA3 655 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 DEFB118Q96PH6 123 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 RNF41Q9H4P4 317 aaPredicted RBP12.02□□□□□ -0.49
CD40-204ENST00000466205 RAVER2Q9HCJ3 691 aaKnown RBP12.02□□□□□ -0.49
CD40-204ENST00000466205 FLRT1Q9NZU1 646 aa12.02□□□□□ -0.49
CD40-204ENST00000466205 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
CD40-204ENST00000466205 DOCK3Q8IZD9 2030 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
CD40-204ENST00000466205 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
CD40-204ENST00000466205 ADORA2AP29274 412 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 STAT3P40763 770 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 GRB14Q14449 540 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 SNRNP48Q6IEG0 339 aaKnown RBP12.01□□□□□ -0.49
CD40-204ENST00000466205 DPP9Q86TI2 863 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 REPS2Q8NFH8 660 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 ESR2Q92731 530 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 USP6NLQ92738 828 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 APBA2Q99767 749 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 TMEM47Q9BQJ4 181 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.01□□□□□ -0.49
CD40-204ENST00000466205 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 ZNF214Q9UL59 606 aaPredicted RBP12.01□□□□□ -0.49
CD40-204ENST00000466205 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 RAD50Q92878 1312 aa12.01□□□□□ -0.49
CD40-204ENST00000466205 TNRC18O15417 2968 aaPredicted RBP12□□□□□ -0.49
CD40-204ENST00000466205 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
CD40-204ENST00000466205 SGSM2O43147 1006 aa12□□□□□ -0.49
CD40-204ENST00000466205 COBLO75128 1261 aa12□□□□□ -0.49
CD40-204ENST00000466205 ZBED4O75132 1171 aa12□□□□□ -0.49
CD40-204ENST00000466205 PGK2P07205 417 aa12□□□□□ -0.49
CD40-204ENST00000466205 CCND3P30281 292 aaPredicted RBP12□□□□□ -0.49
CD40-204ENST00000466205 SLC16A2P36021 539 aa12□□□□□ -0.49
CD40-204ENST00000466205 STAT2P52630 851 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms