RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 FBXO38Q6PIJ6 1188 aa15.16■□□□□ 0.02
LINC00343-203ENST00000454555 TRPM4Q8TD43 1214 aa15.16■□□□□ 0.02
LINC00343-203ENST00000454555 SH3RF3Q8TEJ3 882 aaPredicted RBP15.16■□□□□ 0.02
LINC00343-203ENST00000454555 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
LINC00343-203ENST00000454555 TAF1DQ9H5J8 278 aaPredicted RBP15.16■□□□□ 0.02
LINC00343-203ENST00000454555 TDRD3Q9H7E2 651 aaKnown RBP15.16■□□□□ 0.02
LINC00343-203ENST00000454555 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
LINC00343-203ENST00000454555 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC00343-203ENST00000454555 SCN4AP35499 1836 aa15.16■□□□□ 0.02
LINC00343-203ENST00000454555 CCDC66A2RUB6 948 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 ARHGAP6O43182 974 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 NPM3O75607 178 aaKnown RBP15.15■□□□□ 0.02
LINC00343-203ENST00000454555 UBASH3AP57075 661 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 PNMA8AQ86V59 439 aaPredicted RBP15.15■□□□□ 0.02
LINC00343-203ENST00000454555 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 MTA3Q9BTC8 594 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
LINC00343-203ENST00000454555 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
LINC00343-203ENST00000454555 SH2B2O14492 632 aaPredicted RBP15.14■□□□□ 0.01
LINC00343-203ENST00000454555 GNL2Q13823 731 aaKnown RBP15.14■□□□□ 0.01
LINC00343-203ENST00000454555 PTPAQ15257 358 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 TERF2Q15554 542 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 ALX1Q15699 326 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 FKBP1CQ5VVH2 108 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 ZNF771Q7L3S4 317 aaPredicted RBP15.14■□□□□ 0.01
LINC00343-203ENST00000454555 VSTM4Q8IW00 320 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 RRAGCQ9HB90 399 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 ZNF70Q9UC06 446 aaPredicted RBP15.14■□□□□ 0.01
LINC00343-203ENST00000454555 DNAI1Q9UI46 699 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 ADAMTSL1Q8N6G6 1762 aa15.14■□□□□ 0.01
LINC00343-203ENST00000454555 KIF28PB7ZC32 967 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 PATL2C9JE40 543 aaKnown RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 WDHD1O75717 1129 aaPredicted RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 SERPINC1P01008 464 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 LIFRP42702 1097 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 SYT10Q6XYQ8 523 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 HOMER1Q86YM7 354 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 TEX11Q8IYF3 940 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 ZC3H15Q8WU90 426 aaKnown RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 SLC4A4Q9Y6R1 1079 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 PRKAB2O43741 272 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 SLFN14P0C7P3 912 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 TOP1P11387 765 aaKnown RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 RCAN1P53805 252 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 HAND2P61296 217 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 NAA30Q147X3 362 aaPredicted RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 KRT40Q6A162 431 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 CCDC34Q96HJ3 373 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 ATP8A2Q9NTI2 1148 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 TMOD2Q9NZR1 351 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 MKRN1Q9UHC7 482 aaKnown RBP15.13■□□□□ 0.01
LINC00343-203ENST00000454555 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 ECM29Q5VYK3 1845 aa15.13■□□□□ 0.01
LINC00343-203ENST00000454555 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 ENTPD3O75355 529 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 KANK3Q6NY19 840 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 APOA5Q6Q788 366 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 TGFBRAP1Q8WUH2 860 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 MAP3K14Q99558 947 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 CNNM2Q9H8M5 875 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 PITPNM2Q9BZ72 1349 aa15.12■□□□□ 0.01
LINC00343-203ENST00000454555 CLRN2A0PK11 232 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 ZBTB43O43298 467 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 USP5P45974 858 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 NFIAQ12857 509 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 OTUD7BQ6GQQ9 843 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 SHC4Q6S5L8 630 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 KRBA2Q6ZNG9 492 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 MLKLQ8NB16 471 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 SDR42E1Q8WUS8 393 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 UBXN4Q92575 508 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 ERCC4Q92889 916 aaPredicted RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 HSD3B7Q9H2F3 369 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 NMRK2Q9NPI5 230 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 A0A087WWV3 80 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 BIN1O00499 593 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 STX10O60499 249 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 CACNB3P54284 484 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 TUBB4BP68371 445 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 SAFBQ15424 915 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 NT5DC1Q5TFE4 455 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 ANGEL2Q5VTE6 544 aaKnown RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 FAM83AQ86UY5 434 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 IFNL3Q8IZI9 196 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 KRI1Q8N9T8 703 aaKnown RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 CNNM3Q8NE01 707 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 MNS1Q8NEH6 495 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 NACAP1Q9BZK3 213 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 DDX4Q9NQI0 724 aaKnown RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 GPHNQ9NQX3 736 aaPredicted RBP15.11■□□□□ 0.01
LINC00343-203ENST00000454555 FAM198AQ9UFP1 575 aa15.11■□□□□ 0.01
LINC00343-203ENST00000454555 ASTN2O75129 1339 aaPredicted RBP15.1■□□□□ 0.01
LINC00343-203ENST00000454555 APPP05067 770 aa15.1■□□□□ 0.01
LINC00343-203ENST00000454555 TNFAIP1Q13829 316 aa15.1■□□□□ 0.01
LINC00343-203ENST00000454555 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms