RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 LRCH3Q96II8 777 aa20.88■□□□□ 0.93
DDR1-235ENST00000428153 SENP6Q9GZR1 1112 aaPredicted RBP20.88■□□□□ 0.93
DDR1-235ENST00000428153 LAMA2P24043 3122 aaKnown RBP20.88■□□□□ 0.93
DDR1-235ENST00000428153 ROBO3Q96MS0 1386 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 GREB1LQ9C091 1923 aaPredicted RBP20.87■□□□□ 0.93
DDR1-235ENST00000428153 CHGBP05060 677 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 ZFYP08048 801 aaPredicted RBP20.87■□□□□ 0.93
DDR1-235ENST00000428153 PLS1Q14651 629 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 TMEM132BQ14DG7 1078 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 RIOX2Q8IUF8 465 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 APPBP2Q92624 585 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 UBE2OQ9C0C9 1292 aaKnown RBP20.87■□□□□ 0.93
DDR1-235ENST00000428153 PPP1R9AQ9ULJ8 1098 aa20.87■□□□□ 0.93
DDR1-235ENST00000428153 DIS3Q9Y2L1 958 aaKnown RBP20.87■□□□□ 0.93
DDR1-235ENST00000428153 A0A0C4DFX4 3053 aa20.86■□□□□ 0.93
DDR1-235ENST00000428153 GNAT2P19087 354 aa20.86■□□□□ 0.93
DDR1-235ENST00000428153 LRRFIP1Q32MZ4 808 aaKnown RBP20.86■□□□□ 0.93
DDR1-235ENST00000428153 MAML3Q96JK9 1138 aa20.86■□□□□ 0.93
DDR1-235ENST00000428153 GSG1L2A8MUP6 293 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 VWA5AO00534 786 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 SMARCA5O60264 1052 aaPredicted RBP20.85■□□□□ 0.93
DDR1-235ENST00000428153 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.85■□□□□ 0.93
DDR1-235ENST00000428153 ZNF287Q9HBT7 754 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 NYAP2Q9P242 653 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 SYNPO2Q9UMS6 1093 aa20.85■□□□□ 0.93
DDR1-235ENST00000428153 STAT3P40763 770 aa20.84■□□□□ 0.93
DDR1-235ENST00000428153 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
DDR1-235ENST00000428153 ZNFX1Q9P2E3 1918 aaKnown RBP20.83■□□□□ 0.93
DDR1-235ENST00000428153 KBTBD13C9JR72 458 aa20.83■□□□□ 0.93
DDR1-235ENST00000428153 RNF113AO15541 343 aaKnown RBP20.83■□□□□ 0.93
DDR1-235ENST00000428153 RASA1P20936 1047 aa20.83■□□□□ 0.93
DDR1-235ENST00000428153 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
DDR1-235ENST00000428153 OSBP2Q969R2 916 aa20.83■□□□□ 0.93
DDR1-235ENST00000428153 MKNK2Q9HBH9 465 aa20.83■□□□□ 0.93
DDR1-235ENST00000428153 COL11A1P12107 1806 aaPredicted RBP20.83■□□□□ 0.92
DDR1-235ENST00000428153 TTC41PQ6P2S7 1318 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 KCTD2Q14681 263 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 SNX17Q15036 470 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 MSL3Q8N5Y2 521 aaKnown RBP20.82■□□□□ 0.92
DDR1-235ENST00000428153 MMP19Q99542 508 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 LBHD1Q9BQE6 289 aaPredicted RBP20.82■□□□□ 0.92
DDR1-235ENST00000428153 FBXO28Q9NVF7 368 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 PRKAG2Q9UGJ0 569 aa20.82■□□□□ 0.92
DDR1-235ENST00000428153 ATP2A1O14983 1001 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 GPAA1O43292 621 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 ZNF792Q3KQV3 632 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 FAM83BQ5T0W9 1011 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 GJC2Q5T442 439 aaPredicted RBP20.81■□□□□ 0.92
DDR1-235ENST00000428153 SLC39A5Q6ZMH5 540 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 TINF2Q9BSI4 451 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 TEX13BQ9BXU2 312 aa20.81■□□□□ 0.92
DDR1-235ENST00000428153 IGKV6D-41A0A0C4DH26 115 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 F5H6K3 240 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 ERC2O15083 957 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 ATN1P54259 1190 aaPredicted RBP20.8■□□□□ 0.92
DDR1-235ENST00000428153 RTP1P59025 263 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 KLRC3Q07444 240 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.8■□□□□ 0.92
DDR1-235ENST00000428153 DEFB123Q8N688 67 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 PRPF38AQ8NAV1 312 aaKnown RBP20.8■□□□□ 0.92
DDR1-235ENST00000428153 MKL1Q969V6 931 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 SLF1Q9BQI6 1058 aa20.8■□□□□ 0.92
DDR1-235ENST00000428153 MDM2Q00987 491 aaPredicted RBP20.79■□□□□ 0.92
DDR1-235ENST00000428153 LRRC41Q15345 812 aa20.79■□□□□ 0.92
DDR1-235ENST00000428153 PLXNA1Q9UIW2 1896 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 PLIN4Q96Q06 1357 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 MINDY4BA8MYZ0 360 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 PATL2C9JE40 543 aaKnown RBP20.78■□□□□ 0.92
DDR1-235ENST00000428153 RARBP10826 455 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 TDO2P48775 406 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 SAMD1Q6SPF0 538 aaPredicted RBP20.78■□□□□ 0.92
DDR1-235ENST00000428153 ZNF444Q8N0Y2 327 aaPredicted RBP20.78■□□□□ 0.92
DDR1-235ENST00000428153 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
DDR1-235ENST00000428153 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
DDR1-235ENST00000428153 SMCHD1A6NHR9 2005 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 RAD21O60216 631 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 NDUFB10O96000 172 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 FDX1P10109 184 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 FAM47AQ5JRC9 791 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 PRAMEF19Q5SWL8 479 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 FAM109BQ6ICB4 259 aaPredicted RBP20.77■□□□□ 0.92
DDR1-235ENST00000428153 RNF180Q86T96 592 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 GMCL1P1Q8NEA9 526 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 PHF24Q9UPV7 400 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 STXBP5LQ9Y2K9 1186 aa20.77■□□□□ 0.92
DDR1-235ENST00000428153 SYNGAP1Q96PV0 1343 aa20.77■□□□□ 0.91
DDR1-235ENST00000428153 LTBP2Q14767 1821 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 PGK2P07205 417 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 AKR1A1P14550 325 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 ANO1Q5XXA6 986 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 MAMDC4Q6UXC1 1216 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 IFNL3Q8IZI9 196 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 XPNPEP3Q9NQH7 507 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 MTMR10Q9NXD2 777 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 MTMR4Q9NYA4 1195 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 ATP11BQ9Y2G3 1177 aa20.76■□□□□ 0.91
DDR1-235ENST00000428153 MYH4Q9Y623 1939 aa20.75■□□□□ 0.91
DDR1-235ENST00000428153 DNAJC25-GNG10A0A024R161 153 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms