RNA–Protein interactions for RNA: ENST00000420081.1

LINC00240-201, long intergenic non-protein coding RNA 240, humanhuman

TSL 5

Gene LINC00240, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-201ENST00000420081 SYT17Q9BSW7 474 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 DHX36Q9H2U1 1008 aaKnown RBP5.28□□□□□ -1.56
LINC00240-201ENST00000420081 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 CWC22Q9HCG8 908 aaKnown RBP5.28□□□□□ -1.56
LINC00240-201ENST00000420081 MYOZ2Q9NPC6 264 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 CHMP5Q9NZZ3 219 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 SERPINB13Q9UIV8 391 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 TAF6LQ9Y6J9 622 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 TRPM7Q96QT4 1865 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 PLIN4Q96Q06 1357 aa5.28□□□□□ -1.56
LINC00240-201ENST00000420081 ZC3H4Q9UPT8 1303 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 LOC100996750A0A140TA64 210 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CCDC196A0A1B0GTZ2 297 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TCP10L2B9ZVM9 353 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 GOLGA6L22H0YM25 854 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 GRIN3BO60391 1043 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 ENTPD3O75355 529 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 WDHD1O75717 1129 aaPredicted RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 DDAH1O94760 285 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 AVPP01185 164 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CALM1P0DP23 149 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CALM2P0DP24 149 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CALM3P0DP25 149 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 KIF5BP33176 963 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 RHBDL3P58872 404 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 NUCB2P80303 420 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 HMGN5P82970 282 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 AKAP17AQ02040 695 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 GNL2Q13823 731 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TOB2Q14106 344 aaPredicted RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TRIM29Q14134 588 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 RTN1Q16799 776 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 C16orf86Q6ZW13 317 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CYB5R4Q7L1T6 521 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 APOBEC3FQ8IUX4 373 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TRIM22Q8IYM9 498 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 GPC2Q8N158 579 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TMTC2Q8N394 836 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CTCFLQ8NI51 663 aaPredicted RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 NUP133Q8WUM0 1156 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 CSRNP1Q96S65 589 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 ZSCAN10Q96SZ4 725 aaPredicted RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 PHOX2BQ99453 314 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 ZKSCAN3Q9BRR0 538 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 MTA3Q9BTC8 594 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 KRTAP4-6Q9BYQ5 205 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 EHD4Q9H223 541 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 ALDH8A1Q9H2A2 487 aaPredicted RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 TDRD3Q9H7E2 651 aaKnown RBP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 KCNQ5Q9NR82 932 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 STX8Q9UNK0 236 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.27□□□□□ -1.57
LINC00240-201ENST00000420081 ATRNL1Q5VV63 1379 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 PTPRFP10586 1907 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 PAPPA2Q9BXP8 1791 aa5.27□□□□□ -1.57
LINC00240-201ENST00000420081 WDR33Q9C0J8 1336 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 PARP14Q460N5 1801 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 PHIPQ8WWQ0 1821 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 PTPDC1A2A3K4 754 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 H3BQV1 296 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 FZD9O00144 591 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 SOCS7O14512 581 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 GPR37O15354 613 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 PFKFB2O60825 505 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 LARGE1O95461 756 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 GJB2P29033 226 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 LIFRP42702 1097 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 CDK8P49336 464 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 SMCPP49901 116 aaPredicted RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 RCAN1P53805 252 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 ANTXR2P58335 489 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 CCT2P78371 535 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 EXOSC10Q01780 885 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 ATP2B2Q01814 1243 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 NFIAQ12857 509 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 CUL4AQ13619 759 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 ME3Q16798 604 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 CCDC96Q2M329 555 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 TBC1D10BQ4KMP7 808 aaPredicted RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 FAM47AQ5JRC9 791 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 C9orf131Q5VYM1 1079 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 DCAF15Q66K64 600 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 APOBEC3HQ6NTF7 200 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 APOA5Q6Q788 366 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 RAB11FIP4Q86YS3 637 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 CCDC144CPQ8IYA2 1237 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 ZNF654Q8IZM8 581 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 NECAB1Q8N987 351 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 MTMR14Q8NCE2 650 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 SLC44A5Q8NCS7 719 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 SNIP1Q8TAD8 396 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 WASF1Q92558 559 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 DPF2Q92785 391 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 DYNLL2Q96FJ2 89 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 ZNF274Q96GC6 653 aaPredicted RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 LLPHQ9BRT6 129 aaKnown RBP5.26□□□□□ -1.57
LINC00240-201ENST00000420081 MRIQ9BWK5 157 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 IDI2Q9BXS1 227 aa5.26□□□□□ -1.57
LINC00240-201ENST00000420081 LY9Q9HBG7 655 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms