RNA–Protein interactions for RNA: ENST00000354192.7

APP-203, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-203ENST00000354192 SYNRGQ9UMZ2 1314 aa20.59■□□□□ 0.89
APP-203ENST00000354192 CICQ96RK0 1608 aaPredicted RBP20.59■□□□□ 0.89
APP-203ENST00000354192 CYTH3O43739 400 aa20.59■□□□□ 0.89
APP-203ENST00000354192 MARCH6O60337 910 aa20.59■□□□□ 0.89
APP-203ENST00000354192 SLFN14P0C7P3 912 aa20.59■□□□□ 0.89
APP-203ENST00000354192 GSTO1P78417 241 aa20.59■□□□□ 0.89
APP-203ENST00000354192 NPY5RQ15761 445 aa20.59■□□□□ 0.89
APP-203ENST00000354192 ZC3H12CQ9C0D7 883 aaKnown RBP20.59■□□□□ 0.89
APP-203ENST00000354192 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
APP-203ENST00000354192 SOGA3Q5TF21 947 aa20.58■□□□□ 0.89
APP-203ENST00000354192 LRRN4CLQ8ND94 238 aa20.58■□□□□ 0.89
APP-203ENST00000354192 MED15Q96RN5 788 aa20.58■□□□□ 0.89
APP-203ENST00000354192 PIGSQ96S52 555 aa20.58■□□□□ 0.89
APP-203ENST00000354192 OSBPL5Q9H0X9 879 aaPredicted RBP20.58■□□□□ 0.89
APP-203ENST00000354192 DBNDD1Q9H9R9 158 aa20.58■□□□□ 0.89
APP-203ENST00000354192 PLCH1Q4KWH8 1693 aa20.58■□□□□ 0.89
APP-203ENST00000354192 N4BP3O15049 544 aa20.58■□□□□ 0.89
APP-203ENST00000354192 SLC16A2P36021 539 aa20.58■□□□□ 0.89
APP-203ENST00000354192 NCBP1Q09161 790 aaKnown RBP20.58■□□□□ 0.89
APP-203ENST00000354192 PPFIBP1Q86W92 1011 aa20.58■□□□□ 0.89
APP-203ENST00000354192 VSTM4Q8IW00 320 aa20.58■□□□□ 0.89
APP-203ENST00000354192 GJA10Q969M2 543 aa20.58■□□□□ 0.89
APP-203ENST00000354192 RBM17Q96I25 401 aaKnown RBP20.58■□□□□ 0.89
APP-203ENST00000354192 BAG1Q99933 345 aaPredicted RBP20.58■□□□□ 0.89
APP-203ENST00000354192 BPIFA3Q9BQP9 254 aa20.58■□□□□ 0.89
APP-203ENST00000354192 IMPACTQ9P2X3 320 aa20.58■□□□□ 0.89
APP-203ENST00000354192 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
APP-203ENST00000354192 TTF2Q9UNY4 1162 aaKnown RBP20.58■□□□□ 0.89
APP-203ENST00000354192 TRIM49BA6NDI0 452 aa20.58■□□□□ 0.88
APP-203ENST00000354192 IL17AQ16552 155 aa20.58■□□□□ 0.88
APP-203ENST00000354192 KANK3Q6NY19 840 aa20.58■□□□□ 0.88
APP-203ENST00000354192 DTHD1Q6ZMT9 781 aa20.58■□□□□ 0.88
APP-203ENST00000354192 IRX2Q9BZI1 471 aaPredicted RBP20.58■□□□□ 0.88
APP-203ENST00000354192 PAXBP1Q9Y5B6 917 aa20.58■□□□□ 0.88
APP-203ENST00000354192 USP17L5A8MUK1 530 aa20.57■□□□□ 0.88
APP-203ENST00000354192 RASA1P20936 1047 aa20.57■□□□□ 0.88
APP-203ENST00000354192 GNG11P61952 73 aa20.57■□□□□ 0.88
APP-203ENST00000354192 MORC3Q14149 939 aa20.57■□□□□ 0.88
APP-203ENST00000354192 PPP2R5BQ15173 497 aa20.57■□□□□ 0.88
APP-203ENST00000354192 CCDC96Q2M329 555 aa20.57■□□□□ 0.88
APP-203ENST00000354192 TMEM260Q9NX78 707 aa20.57■□□□□ 0.88
APP-203ENST00000354192 PARP1P09874 1014 aaKnown RBP20.57■□□□□ 0.88
APP-203ENST00000354192 DPP8Q6V1X1 898 aaPredicted RBP20.57■□□□□ 0.88
APP-203ENST00000354192 KIAA0825Q8IV33 1275 aa20.57■□□□□ 0.88
APP-203ENST00000354192 FNBP4Q8N3X1 1017 aaPredicted RBP20.57■□□□□ 0.88
APP-203ENST00000354192 SMCO2A6NFE2 343 aa20.56■□□□□ 0.88
APP-203ENST00000354192 CCDC178Q5BJE1 867 aa20.56■□□□□ 0.88
APP-203ENST00000354192 TECP42680 631 aa20.56■□□□□ 0.88
APP-203ENST00000354192 TXKP42681 527 aa20.56■□□□□ 0.88
APP-203ENST00000354192 DPYDQ12882 1025 aa20.56■□□□□ 0.88
APP-203ENST00000354192 ERCC6LQ2NKX8 1250 aa20.56■□□□□ 0.88
APP-203ENST00000354192 IGSF22Q8N9C0 903 aa20.56■□□□□ 0.88
APP-203ENST00000354192 TBC1D16Q8TBP0 767 aa20.56■□□□□ 0.88
APP-203ENST00000354192 FERMT2Q96AC1 680 aa20.56■□□□□ 0.88
APP-203ENST00000354192 PCMTD1Q96MG8 357 aaPredicted RBP20.56■□□□□ 0.88
APP-203ENST00000354192 KCNQ5Q9NR82 932 aa20.56■□□□□ 0.88
APP-203ENST00000354192 SSBP05455 408 aaKnown RBP eCLIP20.56■□□□□ 0.88
APP-203ENST00000354192 DDR1Q08345 913 aa20.56■□□□□ 0.88
APP-203ENST00000354192 TOGARAM2Q6ZUX3 1019 aa20.56■□□□□ 0.88
APP-203ENST00000354192 HPS3Q969F9 1004 aa20.56■□□□□ 0.88
APP-203ENST00000354192 EPC1Q9H2F5 836 aa20.56■□□□□ 0.88
APP-203ENST00000354192 MAD2L2Q9UI95 211 aa20.56■□□□□ 0.88
APP-203ENST00000354192 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
APP-203ENST00000354192 SPECC1LQ69YQ0 1117 aa20.55■□□□□ 0.88
APP-203ENST00000354192 SOWAHDA6NJG2 315 aa20.55■□□□□ 0.88
APP-203ENST00000354192 CALML3P27482 149 aa20.55■□□□□ 0.88
APP-203ENST00000354192 IKQ13123 557 aaPredicted RBP20.55■□□□□ 0.88
APP-203ENST00000354192 KLHL34Q8N239 644 aa20.55■□□□□ 0.88
APP-203ENST00000354192 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
APP-203ENST00000354192 C4AP0C0L4 1744 aa20.55■□□□□ 0.88
APP-203ENST00000354192 C4BP0C0L5 1744 aa20.55■□□□□ 0.88
APP-203ENST00000354192 DDX60Q8IY21 1712 aaKnown RBP20.55■□□□□ 0.88
APP-203ENST00000354192 RTFDC1Q9BY42 306 aaPredicted RBP20.54■□□□□ 0.88
APP-203ENST00000354192 TMX4Q9H1E5 349 aaPredicted RBP20.54■□□□□ 0.88
APP-203ENST00000354192 PCDHA4Q9UN74 947 aa20.54■□□□□ 0.88
APP-203ENST00000354192 TNNI2P48788 182 aa20.54■□□□□ 0.88
APP-203ENST00000354192 ATP2C1P98194 919 aaPredicted RBP20.54■□□□□ 0.88
APP-203ENST00000354192 MNS1Q8NEH6 495 aa20.54■□□□□ 0.88
APP-203ENST00000354192 FLT1P17948 1338 aa20.54■□□□□ 0.88
APP-203ENST00000354192 A0A0U1RQJ8 604 aa20.54■□□□□ 0.88
APP-203ENST00000354192 FILIP1LQ4L180 1135 aa20.54■□□□□ 0.88
APP-203ENST00000354192 ATRIPQ8WXE1 791 aa20.54■□□□□ 0.88
APP-203ENST00000354192 NUP88Q99567 741 aaPredicted RBP20.54■□□□□ 0.88
APP-203ENST00000354192 SNAP25P60880 206 aa20.53■□□□□ 0.88
APP-203ENST00000354192 DGKHQ86XP1 1220 aa20.53■□□□□ 0.88
APP-203ENST00000354192 MAP7D2Q96T17 732 aa20.53■□□□□ 0.88
APP-203ENST00000354192 RBL2Q08999 1139 aa20.53■□□□□ 0.88
APP-203ENST00000354192 SBK1Q52WX2 424 aa20.53■□□□□ 0.88
APP-203ENST00000354192 KCTD1Q719H9 257 aa20.53■□□□□ 0.88
APP-203ENST00000354192 ZNF579Q8NAF0 562 aaKnown RBP20.53■□□□□ 0.88
APP-203ENST00000354192 NELFBQ8WX92 580 aa20.53■□□□□ 0.88
APP-203ENST00000354192 USP40Q9NVE5 1235 aa20.53■□□□□ 0.88
APP-203ENST00000354192 AHDC1Q5TGY3 1603 aaPredicted RBP20.53■□□□□ 0.88
APP-203ENST00000354192 IDEP14735 1019 aa20.52■□□□□ 0.88
APP-203ENST00000354192 ENOX1Q8TC92 643 aaKnown RBP20.52■□□□□ 0.88
APP-203ENST00000354192 MTA3Q9BTC8 594 aa20.52■□□□□ 0.88
APP-203ENST00000354192 CASP14P31944 242 aa20.52■□□□□ 0.88
APP-203ENST00000354192 SHROOM1Q2M3G4 852 aaPredicted RBP20.52■□□□□ 0.88
APP-203ENST00000354192 NYAP1Q6ZVC0 841 aa20.52■□□□□ 0.88
APP-203ENST00000354192 DYMQ7RTS9 669 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms