RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 STK36Q9NRP7 1315 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 MYO1BO43795 1136 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 NR1I2O75469 434 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 YBX3P16989 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
UBA3-201ENST00000349511 TRIM29Q14134 588 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 PPP2R5BQ15173 497 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 PKN1Q16512 942 aa15.43■□□□□ 0.06
UBA3-201ENST00000349511 MTERF4Q7Z6M4 381 aaKnown RBP15.43■□□□□ 0.06
UBA3-201ENST00000349511 CNTNAP5Q8WYK1 1306 aa15.42■□□□□ 0.06
UBA3-201ENST00000349511 GNL2Q13823 731 aaKnown RBP15.42■□□□□ 0.06
UBA3-201ENST00000349511 RRP1BQ14684 758 aaKnown RBP15.42■□□□□ 0.06
UBA3-201ENST00000349511 BICD2Q8TD16 824 aa15.42■□□□□ 0.06
UBA3-201ENST00000349511 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
UBA3-201ENST00000349511 RNF26Q9BY78 433 aaPredicted RBP15.42■□□□□ 0.06
UBA3-201ENST00000349511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.42■□□□□ 0.06
UBA3-201ENST00000349511 FRMPD2Q68DX3 1309 aaPredicted RBP15.42■□□□□ 0.06
UBA3-201ENST00000349511 USP17L5A8MUK1 530 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 NPM3O75607 178 aaKnown RBP15.41■□□□□ 0.06
UBA3-201ENST00000349511 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
UBA3-201ENST00000349511 KIF5BP33176 963 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 JAG1P78504 1218 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
UBA3-201ENST00000349511 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
UBA3-201ENST00000349511 FAM151AQ8WW52 585 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 USP28Q96RU2 1077 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 IGKV6D-41A0A0C4DH26 115 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 TTLL1O95922 423 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 LMNB1P20700 586 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 NT5C2P49902 561 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 GRM4Q14833 912 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 SEPT2Q15019 361 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 SLC35G1Q2M3R5 365 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 MTMR14Q8NCE2 650 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 WASF1Q92558 559 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 ZBED3Q96IU2 234 aaPredicted RBP15.41■□□□□ 0.06
UBA3-201ENST00000349511 VAT1LQ9HCJ6 419 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 ATRNL1Q5VV63 1379 aa15.41■□□□□ 0.06
UBA3-201ENST00000349511 BTBD18B2RXH4 712 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 PRPF3O43395 683 aaKnown RBP15.4■□□□□ 0.06
UBA3-201ENST00000349511 CYTH3O43739 400 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 GTF2F1P35269 517 aaKnown RBP eCLIP15.4■□□□□ 0.06
UBA3-201ENST00000349511 TATDN1Q6P1N9 297 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 UBA5Q9GZZ9 404 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 KLRF2D3W0D1 207 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 PTGS1P23219 599 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 RPS12P25398 132 aaKnown RBP15.4■□□□□ 0.06
UBA3-201ENST00000349511 ZNF280AP59817 542 aaPredicted RBP15.4■□□□□ 0.06
UBA3-201ENST00000349511 NR5A1Q13285 461 aa15.4■□□□□ 0.06
UBA3-201ENST00000349511 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.4■□□□□ 0.06
UBA3-201ENST00000349511 PLIN4Q96Q06 1357 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 GH2P01242 217 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 MMP1P03956 469 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
UBA3-201ENST00000349511 RASA3Q14644 834 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 ABCB5Q2M3G0 1257 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
UBA3-201ENST00000349511 OXER1Q8TDS5 423 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 TSC1Q92574 1164 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 GPKOWQ92917 476 aaPredicted RBP eCLIP15.39■□□□□ 0.05
UBA3-201ENST00000349511 CFAP45Q9UL16 551 aa15.39■□□□□ 0.05
UBA3-201ENST00000349511 PALM3A6NDB9 673 aaPredicted RBP15.38■□□□□ 0.05
UBA3-201ENST00000349511 PDHBP11177 359 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 EEF2P13639 858 aaKnown RBP15.38■□□□□ 0.05
UBA3-201ENST00000349511 NOVP48745 357 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 HOMER1Q86YM7 354 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 DPF2Q92785 391 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 CCDC17Q96LX7 622 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 GPCPD1Q9NPB8 672 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 RNF181Q9P0P0 153 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 MYH4Q9Y623 1939 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 MYH15Q9Y2K3 1946 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 DDNO94850 711 aaPredicted RBP15.38■□□□□ 0.05
UBA3-201ENST00000349511 KIF4BQ2VIQ3 1234 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 MYSM1Q5VVJ2 828 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 PRAMEF18Q5VWM3 479 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 PLA2G4DQ86XP0 818 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 DNAJC25Q9H1X3 360 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 HACL1Q9UJ83 578 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 CLIC4Q9Y696 253 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 SBF1O95248 1867 aa15.38■□□□□ 0.05
UBA3-201ENST00000349511 EPS15P42566 896 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ZNF165P49910 485 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ZNF75DP51815 510 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 KCTD1Q719H9 257 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 CCDC186Q7Z3E2 898 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 METTL16Q86W50 562 aaKnown RBP15.37■□□□□ 0.05
UBA3-201ENST00000349511 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 MAP3K14Q99558 947 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ZMYND15Q9H091 742 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ADAMTS3O15072 1205 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 SCG2P13521 617 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ICA1Q05084 483 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 SIAH1Q8IUQ4 282 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 ZNF710Q8N1W2 664 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 TRIM5Q9C035 493 aa15.37■□□□□ 0.05
UBA3-201ENST00000349511 H7C1D1 291 aa15.36■□□□□ 0.05
UBA3-201ENST00000349511 ATP2B1P20020 1258 aa15.36■□□□□ 0.05
UBA3-201ENST00000349511 SAFBQ15424 915 aaKnown RBP eCLIP15.36■□□□□ 0.05
UBA3-201ENST00000349511 TTBK2Q6IQ55 1244 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms