RNA–Protein interactions for RNA: ENST00000335497.11

RNF220-201, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 1,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-201ENST00000335497 OSBP2Q969R2 916 aa31.13■■■□□ 2.57
RNF220-201ENST00000335497 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.13■■■□□ 2.57
RNF220-201ENST00000335497 SENP6Q9GZR1 1112 aaPredicted RBP31.13■■■□□ 2.57
RNF220-201ENST00000335497 FCER1AP12319 257 aa31.12■■■□□ 2.57
RNF220-201ENST00000335497 SAMD1Q6SPF0 538 aaPredicted RBP31.12■■■□□ 2.57
RNF220-201ENST00000335497 RIOX2Q8IUF8 465 aa31.11■■■□□ 2.57
RNF220-201ENST00000335497 ROBO3Q96MS0 1386 aa31.11■■■□□ 2.57
RNF220-201ENST00000335497 GREB1LQ9C091 1923 aaPredicted RBP31.11■■■□□ 2.57
RNF220-201ENST00000335497 PPP1R9AQ9ULJ8 1098 aa31.11■■■□□ 2.57
RNF220-201ENST00000335497 SEPT4O43236 478 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 RASA1P20936 1047 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 TSHZ3Q63HK5 1081 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 ARRDC4Q8NCT1 418 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 LRCH3Q96II8 777 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 MKNK2Q9HBH9 465 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 FBXO28Q9NVF7 368 aa31.1■■■□□ 2.57
RNF220-201ENST00000335497 VWA5AO00534 786 aa31.09■■■□□ 2.57
RNF220-201ENST00000335497 GPAA1O43292 621 aa31.09■■■□□ 2.57
RNF220-201ENST00000335497 GNAT2P19087 354 aa31.09■■■□□ 2.57
RNF220-201ENST00000335497 LRRFIP1Q32MZ4 808 aaKnown RBP31.09■■■□□ 2.57
RNF220-201ENST00000335497 TDHQ8IZJ6 230 aa31.09■■■□□ 2.57
RNF220-201ENST00000335497 MAML3Q96JK9 1138 aa31.09■■■□□ 2.57
RNF220-201ENST00000335497 COL11A1P12107 1806 aaPredicted RBP31.09■■■□□ 2.57
RNF220-201ENST00000335497 MINDY4BA8MYZ0 360 aa31.08■■■□□ 2.57
RNF220-201ENST00000335497 FAM83BQ5T0W9 1011 aa31.08■■■□□ 2.57
RNF220-201ENST00000335497 GPR153Q6NV75 609 aa31.08■■■□□ 2.57
RNF220-201ENST00000335497 UBE2OQ9C0C9 1292 aaKnown RBP31.08■■■□□ 2.57
RNF220-201ENST00000335497 NYAP2Q9P242 653 aa31.08■■■□□ 2.57
RNF220-201ENST00000335497 TTC41PQ6P2S7 1318 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 ZNFX1Q9P2E3 1918 aaKnown RBP31.07■■■□□ 2.56
RNF220-201ENST00000335497 RAD21O60216 631 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 COPB2P35606 906 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 STAT3P40763 770 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 LRIT3Q3SXY7 679 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 MMP19Q99542 508 aa31.07■■■□□ 2.56
RNF220-201ENST00000335497 ZNF287Q9HBT7 754 aa31.06■■■□□ 2.56
RNF220-201ENST00000335497 NRBP1Q9UHY1 535 aa31.06■■■□□ 2.56
RNF220-201ENST00000335497 ZNF214Q9UL59 606 aaPredicted RBP31.06■■■□□ 2.56
RNF220-201ENST00000335497 GJC2Q5T442 439 aaPredicted RBP31.05■■■□□ 2.56
RNF220-201ENST00000335497 REPS2Q8NFH8 660 aa31.05■■■□□ 2.56
RNF220-201ENST00000335497 EPB41L4AQ9HCS5 686 aaPredicted RBP31.05■■■□□ 2.56
RNF220-201ENST00000335497 DIS3Q9Y2L1 958 aaKnown RBP31.05■■■□□ 2.56
RNF220-201ENST00000335497 M0R2C6 588 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 ERC2O15083 957 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 TDO2P48775 406 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 KCTD2Q14681 263 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 PRAMEF19Q5SWL8 479 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 STK11IPQ8N1F8 1099 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 SLF1Q9BQI6 1058 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 PCDHB15Q9Y5E8 787 aa31.04■■■□□ 2.56
RNF220-201ENST00000335497 PATL2C9JE40 543 aaKnown RBP31.03■■■□□ 2.56
RNF220-201ENST00000335497 KBTBD13C9JR72 458 aa31.03■■■□□ 2.56
RNF220-201ENST00000335497 F5H6K3 240 aa31.03■■■□□ 2.56
RNF220-201ENST00000335497 ATN1P54259 1190 aaPredicted RBP31.03■■■□□ 2.56
RNF220-201ENST00000335497 KLRC3Q07444 240 aa31.03■■■□□ 2.56
RNF220-201ENST00000335497 ANO1Q5XXA6 986 aa31.03■■■□□ 2.56
RNF220-201ENST00000335497 ZNF444Q8N0Y2 327 aaPredicted RBP31.03■■■□□ 2.56
RNF220-201ENST00000335497 IGKV6D-41A0A0C4DH26 115 aa31.02■■■□□ 2.56
RNF220-201ENST00000335497 APPP05067 770 aa31.02■■■□□ 2.56
RNF220-201ENST00000335497 ZNF792Q3KQV3 632 aa31.02■■■□□ 2.56
RNF220-201ENST00000335497 NDUFB10O96000 172 aa31.01■■■□□ 2.55
RNF220-201ENST00000335497 MDM2Q00987 491 aaPredicted RBP31.01■■■□□ 2.55
RNF220-201ENST00000335497 PI4K2BQ8TCG2 481 aa31.01■■■□□ 2.55
RNF220-201ENST00000335497 MKL1Q969V6 931 aa31.01■■■□□ 2.55
RNF220-201ENST00000335497 NUP88Q99567 741 aaPredicted RBP31.01■■■□□ 2.55
RNF220-201ENST00000335497 SYNPO2Q9UMS6 1093 aa31.01■■■□□ 2.55
RNF220-201ENST00000335497 PGK2P07205 417 aa31■■■□□ 2.55
RNF220-201ENST00000335497 RTP1P59025 263 aa31■■■□□ 2.55
RNF220-201ENST00000335497 IFNL3Q8IZI9 196 aa31■■■□□ 2.55
RNF220-201ENST00000335497 PRPF38AQ8NAV1 312 aaKnown RBP31■■■□□ 2.55
RNF220-201ENST00000335497 TINF2Q9BSI4 451 aa31■■■□□ 2.55
RNF220-201ENST00000335497 TEX13BQ9BXU2 312 aa31■■■□□ 2.55
RNF220-201ENST00000335497 NACAP1Q9BZK3 213 aa31■■■□□ 2.55
RNF220-201ENST00000335497 CLIP2Q9UDT6 1046 aa31■■■□□ 2.55
RNF220-201ENST00000335497 SLC39A5Q6ZMH5 540 aa30.99■■■□□ 2.55
RNF220-201ENST00000335497 LBHD1Q9BQE6 289 aaPredicted RBP30.99■■■□□ 2.55
RNF220-201ENST00000335497 PLXNA1Q9UIW2 1896 aa30.98■■■□□ 2.55
RNF220-201ENST00000335497 LRRC41Q15345 812 aa30.98■■■□□ 2.55
RNF220-201ENST00000335497 MTMR4Q9NYA4 1195 aa30.98■■■□□ 2.55
RNF220-201ENST00000335497 PRKAG2Q9UGJ0 569 aa30.98■■■□□ 2.55
RNF220-201ENST00000335497 COL6A3P12111 3177 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 MYH4Q9Y623 1939 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 ATP2A1O14983 1001 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 PRDM1O75626 825 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 FAM47AQ5JRC9 791 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 CEP95Q96GE4 821 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 FSD1Q9BTV5 496 aa30.97■■■□□ 2.55
RNF220-201ENST00000335497 TTLL1O95922 423 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 RARBP10826 455 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 PDE4BQ07343 736 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 SNX17Q15036 470 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 ZMYM1Q5SVZ6 1142 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 SNRNP48Q6IEG0 339 aaKnown RBP30.96■■■□□ 2.55
RNF220-201ENST00000335497 MSL3Q8N5Y2 521 aaKnown RBP30.96■■■□□ 2.55
RNF220-201ENST00000335497 OTUD7AQ8TE49 926 aaPredicted RBP30.96■■■□□ 2.55
RNF220-201ENST00000335497 SEC62Q99442 399 aaKnown RBP30.96■■■□□ 2.55
RNF220-201ENST00000335497 ATP11BQ9Y2G3 1177 aa30.96■■■□□ 2.55
RNF220-201ENST00000335497 SMCHD1A6NHR9 2005 aa30.95■■■□□ 2.55
RNF220-201ENST00000335497 PLIN4Q96Q06 1357 aa30.95■■■□□ 2.55
RNF220-201ENST00000335497 MYCNP04198 464 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms