RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 RTP1P59025 263 aa17.13■□□□□ 0.33
RPP40-201ENST00000319533 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
RPP40-201ENST00000319533 MAML3Q96JK9 1138 aa17.13■□□□□ 0.33
RPP40-201ENST00000319533 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
RPP40-201ENST00000319533 CYP2D7A0A087X1C5 515 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 POTEB2H3BUK9 544 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 DLL1O00548 723 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 CHGBP05060 677 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 ATN1P54259 1190 aaPredicted RBP17.12■□□□□ 0.33
RPP40-201ENST00000319533 TMEM132BQ14DG7 1078 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 SNX17Q15036 470 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 SLC39A5Q6ZMH5 540 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 NCAPG2Q86XI2 1143 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 SPICE1Q8N0Z3 855 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 LBHD1Q9BQE6 289 aaPredicted RBP17.12■□□□□ 0.33
RPP40-201ENST00000319533 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 NRBP1Q9UHY1 535 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
RPP40-201ENST00000319533 FCER1AP12319 257 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 EEF2P13639 858 aaKnown RBP17.11■□□□□ 0.33
RPP40-201ENST00000319533 PLS1Q14651 629 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 C1orf53Q5VUE5 145 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 CTR9Q6PD62 1173 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 LTBP2Q14767 1821 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 MYH7P12883 1935 aa17.11■□□□□ 0.33
RPP40-201ENST00000319533 LAMA2P24043 3122 aaKnown RBP17.1■□□□□ 0.33
RPP40-201ENST00000319533 CUL9Q8IWT3 2517 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 KBTBD13C9JR72 458 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 LRRC41Q15345 812 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 PRAMEF19Q5SWL8 479 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 ZSCAN25Q6NSZ9 544 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 DDRGK1Q96HY6 314 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPP40-201ENST00000319533 PUS7LQ9H0K6 701 aaKnown RBP17.1■□□□□ 0.33
RPP40-201ENST00000319533 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
RPP40-201ENST00000319533 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
RPP40-201ENST00000319533 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
RPP40-201ENST00000319533 VWA5AO00534 786 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 ZNF792Q3KQV3 632 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 SBK1Q52WX2 424 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 ANO1Q5XXA6 986 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 REPS2Q8NFH8 660 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 FBXO28Q9NVF7 368 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 PRKAG2Q9UGJ0 569 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
RPP40-201ENST00000319533 PPP1R9AQ9ULJ8 1098 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 ATP11BQ9Y2G3 1177 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 ROBO3Q96MS0 1386 aa17.09■□□□□ 0.33
RPP40-201ENST00000319533 GREB1LQ9C091 1923 aaPredicted RBP17.09■□□□□ 0.33
RPP40-201ENST00000319533 COL11A1P12107 1806 aaPredicted RBP17.08■□□□□ 0.33
RPP40-201ENST00000319533 COPB2P35606 906 aa17.08■□□□□ 0.32
RPP40-201ENST00000319533 STRBPQ96SI9 672 aaKnown RBP17.08■□□□□ 0.32
RPP40-201ENST00000319533 MMP19Q99542 508 aa17.08■□□□□ 0.32
RPP40-201ENST00000319533 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.32
RPP40-201ENST00000319533 GOPCQ9HD26 462 aa17.08■□□□□ 0.32
RPP40-201ENST00000319533 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
RPP40-201ENST00000319533 PHF24Q9UPV7 400 aa17.08■□□□□ 0.32
RPP40-201ENST00000319533 STAT3P40763 770 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 FAM47AQ5JRC9 791 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 TINF2Q9BSI4 451 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 PDLIM7Q9NR12 457 aa17.07■□□□□ 0.32
RPP40-201ENST00000319533 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
RPP40-201ENST00000319533 KCTD2Q14681 263 aa17.06■□□□□ 0.32
RPP40-201ENST00000319533 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
RPP40-201ENST00000319533 GUCD1Q96NT3 240 aa17.06■□□□□ 0.32
RPP40-201ENST00000319533 BCL11AQ9H165 835 aa17.06■□□□□ 0.32
RPP40-201ENST00000319533 GSG1L2A8MUP6 293 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 PGK2P07205 417 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 ZNF865P0CJ78 1059 aaPredicted RBP17.05■□□□□ 0.32
RPP40-201ENST00000319533 RARBP10826 455 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 RASA1P20936 1047 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 SHHQ15465 462 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 MSL3Q8N5Y2 521 aaKnown RBP17.05■□□□□ 0.32
RPP40-201ENST00000319533 XPNPEP3Q9NQH7 507 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
RPP40-201ENST00000319533 PLXNA1Q9UIW2 1896 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 TRIM43BA6NCK2 446 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 ATP2A1O14983 1001 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
RPP40-201ENST00000319533 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
RPP40-201ENST00000319533 RNF180Q86T96 592 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 KBTBD3Q8NAB2 608 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 BADQ92934 168 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 FERMT2Q96AC1 680 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
RPP40-201ENST00000319533 SLF1Q9BQI6 1058 aa17.04■□□□□ 0.32
RPP40-201ENST00000319533 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 IGKV6D-41A0A0C4DH26 115 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 AKR1A1P14550 325 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 TLE2Q04725 743 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 C9orf50Q5SZB4 431 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 MAMDC4Q6UXC1 1216 aa17.03■□□□□ 0.32
RPP40-201ENST00000319533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms