RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PRELPP51888 382 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 KLRC3Q07444 240 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 TNIP1Q15025 636 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 SASS6Q6UVJ0 657 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
LIN28A-201ENST00000254231 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 TCHHQ07283 1943 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 ADM5C9JUS6 153 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 WNT7AO00755 349 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 CHMP2AO43633 222 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 XRCC6P12956 609 aaKnown RBP eCLIP13.35□□□□□ -0.27
LIN28A-201ENST00000254231 SHMT1P34896 483 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 UBE2HP62256 183 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 ANO1Q5XXA6 986 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 MTMR4Q9NYA4 1195 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
LIN28A-201ENST00000254231 PP2D1A8MPX8 630 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 TTLL1O95922 423 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 SCG2P13521 617 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 TXKP42681 527 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 TYW1BQ6NUM6 668 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 RBSNQ9H1K0 784 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 DNAJC18Q9H819 358 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 SBF2Q86WG5 1849 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 CYTH3O43739 400 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
LIN28A-201ENST00000254231 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIN28A-201ENST00000254231 IFNAR1P17181 557 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 ZNF76P36508 570 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 PPP4CP60510 307 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 CSPP1Q1MSJ5 1256 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 NSMFQ6X4W1 530 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 ZDHHC15Q96MV8 337 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
LIN28A-201ENST00000254231 ZHX2Q9Y6X8 837 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 BECN2A8MW95 431 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 PRKCSHP14314 528 aaPredicted RBP13.34□□□□□ -0.27
LIN28A-201ENST00000254231 KRT2P35908 639 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 PTGER2P43116 358 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 NDUFA8P51970 172 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 TGFB2P61812 414 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 NTRK3Q16288 839 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 MAEAQ7L5Y9 396 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 RTEL1Q9NZ71 1219 aa13.34□□□□□ -0.27
LIN28A-201ENST00000254231 EPB41L2O43491 1005 aaKnown RBP13.33□□□□□ -0.27
LIN28A-201ENST00000254231 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.27
LIN28A-201ENST00000254231 EPSTI1Q96J88 318 aa13.33□□□□□ -0.27
LIN28A-201ENST00000254231 PCDHA1Q9Y5I3 950 aa13.33□□□□□ -0.27
LIN28A-201ENST00000254231 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
LIN28A-201ENST00000254231 CALM1P0DP23 149 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 CALM2P0DP24 149 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 CALM3P0DP25 149 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.28
LIN28A-201ENST00000254231 HHIPL2Q6UWX4 724 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 LUZP1Q86V48 1076 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 NOSTRINQ8IVI9 506 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 WASF1Q92558 559 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.28
LIN28A-201ENST00000254231 AKAP11Q9UKA4 1901 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 FOXN1O15353 648 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 POLR2DO15514 142 aaKnown RBP13.33□□□□□ -0.28
LIN28A-201ENST00000254231 MBD3O95983 291 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 TBC1D5Q92609 795 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 ARID3AQ99856 593 aa13.33□□□□□ -0.28
LIN28A-201ENST00000254231 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
LIN28A-201ENST00000254231 A0A1W2PRG0 241 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 BLZF1Q9H2G9 400 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
LIN28A-201ENST00000254231 RFX7Q2KHR2 1363 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 FLOT1O75955 427 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 ALAS1P13196 640 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 PTGDRQ13258 359 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 NEDD1Q8NHV4 660 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.32□□□□□ -0.28
LIN28A-201ENST00000254231 CACNA1SQ13698 1873 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 TRAF5O00463 557 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 STX17P56962 302 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 SULF1Q8IWU6 871 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 ADGRF4Q8IZF3 695 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 TSPY26PQ9H489 355 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 GOLPH3LQ9H4A5 285 aa13.32□□□□□ -0.28
LIN28A-201ENST00000254231 HMGCS2P54868 508 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 PURBQ96QR8 312 aaKnown RBP13.31□□□□□ -0.28
LIN28A-201ENST00000254231 IRS2Q9Y4H2 1338 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 PDHBP11177 359 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
LIN28A-201ENST00000254231 MYO9BQ13459 2157 aa13.31□□□□□ -0.28
LIN28A-201ENST00000254231 NDUFB10O96000 172 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms