RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 SLF2Q8IX21 1173 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 PCDHA4Q9UN74 947 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 DAGLAQ9Y4D2 1042 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 ANKRD31Q8N7Z5 1873 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 TRAPPC10P48553 1259 aa24.7■■□□□ 1.55
CLN6-201ENST00000249806 WWC2Q6AWC2 1192 aa24.7■■□□□ 1.55
CLN6-201ENST00000249806 PAGE5Q96GU1 130 aa24.7■■□□□ 1.55
CLN6-201ENST00000249806 SH3GLB2Q9NR46 395 aa24.7■■□□□ 1.55
CLN6-201ENST00000249806 SRGNP10124 158 aa24.7■■□□□ 1.54
CLN6-201ENST00000249806 TPD52L1Q16890 204 aaPredicted RBP24.7■■□□□ 1.54
CLN6-201ENST00000249806 MLKLQ8NB16 471 aa24.7■■□□□ 1.54
CLN6-201ENST00000249806 NEDD1Q8NHV4 660 aa24.7■■□□□ 1.54
CLN6-201ENST00000249806 PTPN21Q16825 1174 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 HEATR3Q7Z4Q2 680 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 TRMT44Q8IYL2 757 aaKnown RBP24.69■■□□□ 1.54
CLN6-201ENST00000249806 MXD3Q9BW11 206 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 LRRC37AA6NMS7 1700 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 KLRF2D3W0D1 207 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 DYNC1I1O14576 645 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 PICALMQ13492 652 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 CFAP100Q494V2 611 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 CEP95Q96GE4 821 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 MED15Q96RN5 788 aa24.69■■□□□ 1.54
CLN6-201ENST00000249806 TMC4Q7Z404 712 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 SH3RF1Q7Z6J0 888 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 CERS5Q8N5B7 392 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 TRIML1Q8N9V2 468 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 TSC1Q92574 1164 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 STAMQ92783 540 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 COA1Q9GZY4 146 aa24.68■■□□□ 1.54
CLN6-201ENST00000249806 M0R2N6 131 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 DOK7Q18PE1 504 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 USP17L2Q6R6M4 530 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 NLGN1Q8N2Q7 840 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 ZC3H12CQ9C0D7 883 aaKnown RBP24.67■■□□□ 1.54
CLN6-201ENST00000249806 TNNT1P13805 278 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 PCDHA6Q9UN73 950 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 NFE2L3Q9Y4A8 694 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 PCDHA8Q9Y5H6 950 aa24.67■■□□□ 1.54
CLN6-201ENST00000249806 TMEM232C9JQI7 657 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 C4orf32Q8N8J7 132 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 TRMT1Q9NXH9 659 aaKnown RBP24.66■■□□□ 1.54
CLN6-201ENST00000249806 BARHL2Q9NY43 387 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 STXBP3O00186 592 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 CDC25AP30304 524 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 DACH1Q9UI36 760 aa24.66■■□□□ 1.54
CLN6-201ENST00000249806 RIOK3O14730 519 aaKnown RBP24.65■■□□□ 1.54
CLN6-201ENST00000249806 ENOX1Q8TC92 643 aaKnown RBP24.65■■□□□ 1.54
CLN6-201ENST00000249806 CCDC34Q96HJ3 373 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 CCDC194A0A1B0GVG4 234 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 CBFA2T2O43439 604 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 PARP1P09874 1014 aaKnown RBP24.65■■□□□ 1.54
CLN6-201ENST00000249806 SFPQP23246 707 aaKnown RBP eCLIP24.65■■□□□ 1.54
CLN6-201ENST00000249806 DPYDQ12882 1025 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 CCDC150Q8NCX0 1101 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 AKT1S1Q96B36 256 aa24.65■■□□□ 1.54
CLN6-201ENST00000249806 TTF2Q9UNY4 1162 aaKnown RBP24.65■■□□□ 1.54
CLN6-201ENST00000249806 NPR1P16066 1061 aa24.64■■□□□ 1.54
CLN6-201ENST00000249806 E2F4Q16254 413 aa24.64■■□□□ 1.54
CLN6-201ENST00000249806 HOMER1Q86YM7 354 aa24.64■■□□□ 1.54
CLN6-201ENST00000249806 INTS13Q9NVM9 706 aa24.64■■□□□ 1.54
CLN6-201ENST00000249806 APBA3O96018 575 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 CD44P16070 742 aaKnown RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 SCNN1DP51172 638 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 INF2Q27J81 1249 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 DPP8Q6V1X1 898 aaPredicted RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 LZTS2Q9BRK4 669 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 VAT1LQ9HCJ6 419 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 DDX4Q9NQI0 724 aaKnown RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 SAMSN1Q9NSI8 373 aaKnown RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 TOP1P11387 765 aaKnown RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 ZNF18P17022 549 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 GTF2F1P35269 517 aaKnown RBP eCLIP24.63■■□□□ 1.531e-6■■■■□ 26
CLN6-201ENST00000249806 SMYD4Q8IYR2 804 aaPredicted RBP24.63■■□□□ 1.53
CLN6-201ENST00000249806 CCDC148Q8NFR7 591 aa24.63■■□□□ 1.53
CLN6-201ENST00000249806 FOCADQ5VW36 1801 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 MYO1BO43795 1136 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 MMP10P09238 476 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 CDK11BP21127 795 aaKnown RBP24.62■■□□□ 1.53
CLN6-201ENST00000249806 ARL6IP4Q66PJ3 421 aaKnown RBP24.62■■□□□ 1.53
CLN6-201ENST00000249806 VSTM4Q8IW00 320 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 CCAR2Q8N163 923 aaKnown RBP24.62■■□□□ 1.53
CLN6-201ENST00000249806 IQUBQ8NA54 791 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 SPZ1Q9BXG8 430 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 BLZF1Q9H2G9 400 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 KLHL10Q6JEL2 608 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 DAGLBQ8NCG7 672 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 MTRQ99707 1265 aa24.62■■□□□ 1.53
CLN6-201ENST00000249806 USP17L5A8MUK1 530 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 GSDMAQ96QA5 445 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 UBA5Q9GZZ9 404 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 TMEM60Q9H2L4 133 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 PLSCR1O15162 318 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 ALDH1B1P30837 517 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 GOLGA8FQ08AF8 430 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 GOLGA8DPQ0D2H9 430 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 MSL1Q68DK7 614 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 PDXDC2PQ6P474 469 aa24.61■■□□□ 1.53
CLN6-201ENST00000249806 ERCC5P28715 1186 aaPredicted RBP24.6■■□□□ 1.53
CLN6-201ENST00000249806 NOVP48745 357 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms