RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 TRIB2Q92519 343 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 KRT23Q9C075 422 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 INCENPQ9NQS7 918 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
UPK1A-201ENST00000222275 SGPL1O95470 568 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 HAND2P61296 217 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 CTDSPL2Q05D32 466 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 LBX2Q6XYB7 198 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 ESR2Q92731 530 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 DEFB118Q96PH6 123 aa16.09■□□□□ 0.17
UPK1A-201ENST00000222275 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
UPK1A-201ENST00000222275 RLFQ13129 1914 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
UPK1A-201ENST00000222275 UBXN2AP68543 259 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 KRT32Q14532 448 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.08■□□□□ 0.16
UPK1A-201ENST00000222275 TRIOBPQ9H2D6 2365 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 LAMA4Q16363 1823 aa16.08■□□□□ 0.16
UPK1A-201ENST00000222275 TSPY2A6NKD2 308 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 PRDM1O75626 825 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 CYP21A2P08686 494 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 ICA1Q05084 483 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 COG2Q14746 738 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 CCDC178Q5BJE1 867 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 PLEKHH3Q7Z736 793 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 SH2D4AQ9H788 454 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 VCPKMTQ9H867 229 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 KANSL2Q9H9L4 492 aa16.07■□□□□ 0.16
UPK1A-201ENST00000222275 LAMA3Q16787 3333 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 IGKV6D-41A0A0C4DH26 115 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
UPK1A-201ENST00000222275 IGHA2P01877 340 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 MAPK4P31152 587 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 DSG3P32926 999 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 TFAP4Q01664 338 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 CREB3L3Q68CJ9 461 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 RALYLQ86SE5 291 aaKnown RBP16.06■□□□□ 0.16
UPK1A-201ENST00000222275 NEDD1Q8NHV4 660 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 NCOA7Q8NI08 942 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 ATG4CQ96DT6 458 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
UPK1A-201ENST00000222275 MOV10L1Q9BXT6 1211 aaKnown RBP16.06■□□□□ 0.16
UPK1A-201ENST00000222275 PLIN4Q96Q06 1357 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 SLC27A2O14975 620 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 HMGCRP04035 888 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 XRCC5P13010 732 aaKnown RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 PTPREP23469 700 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 HSPA4P34932 840 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 CACNB2Q08289 660 aaPredicted RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 TSGA10IPQ3SY00 556 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 IQCA1Q86XH1 822 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 NPLOC4Q8TAT6 608 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 NKX2-3Q8TAU0 364 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 DIS3LQ8TF46 1054 aaKnown RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 TANGO6Q9C0B7 1094 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 UPF2Q9HAU5 1272 aaKnown RBP16.05■□□□□ 0.16
UPK1A-201ENST00000222275 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 HOXC10Q9NYD6 342 aa16.05■□□□□ 0.16
UPK1A-201ENST00000222275 H0YGN5 161 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 TFRCP02786 760 aaKnown RBP16.04■□□□□ 0.16
UPK1A-201ENST00000222275 C8orf34Q49A92 452 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 GTF3C2Q8WUA4 911 aaPredicted RBP16.04■□□□□ 0.16
UPK1A-201ENST00000222275 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 SYNPO2Q9UMS6 1093 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
UPK1A-201ENST00000222275 E7EWF7 191 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 COBLO75128 1261 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 HMGB1P09429 215 aaKnown RBP16.03■□□□□ 0.16
UPK1A-201ENST00000222275 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-201ENST00000222275 MAP2K5Q13163 448 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 TMEM132BQ14DG7 1078 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 FAM47AQ5JRC9 791 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
UPK1A-201ENST00000222275 KCNB2Q92953 911 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 TTC14Q96N46 770 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 MTA3Q9BTC8 594 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 NBPF3Q9H094 633 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 NYAP2Q9P242 653 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 PCDH10Q9P2E7 1040 aa16.03■□□□□ 0.16
UPK1A-201ENST00000222275 RPTORQ8N122 1335 aa16.02■□□□□ 0.16
UPK1A-201ENST00000222275 KDM4AO75164 1064 aa16.02■□□□□ 0.16
UPK1A-201ENST00000222275 FLOT1O75955 427 aa16.02■□□□□ 0.16
UPK1A-201ENST00000222275 TTLL1O95922 423 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms