RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 OTUD7BQ6GQQ9 843 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 UPF1Q92900 1129 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■■ 29
APOBEC3D-201ENST00000216099 DCP1AQ9NPI6 582 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 TNKSO95271 1327 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 KIF28PB7ZC32 967 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 POLRMTO00411 1230 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 TRIM37O94972 964 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 RXRAP19793 462 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 IRX3P78415 501 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 GPSM2P81274 684 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZSCAN30Q86W11 494 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 IFNL1Q8IU54 200 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 TRIM22Q8IYM9 498 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 ENGASEQ8NFI3 743 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZNF622Q969S3 477 aaKnown RBP eCLIP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZSCAN10Q96SZ4 725 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 MYH8P13535 1937 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 LDHBP07195 334 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 CALM1P0DP23 149 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 CALM2P0DP24 149 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 CALM3P0DP25 149 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 PPP4CP60510 307 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 FANCCQ00597 558 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 CEBPZQ03701 1054 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 DDR1Q08345 913 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 STK38Q15208 465 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 ANO1Q5XXA6 986 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 FANCBQ8NB91 859 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 FAM200AQ8TCP9 573 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 PHKBQ93100 1093 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 MAP7D2Q96T17 732 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 MRVI1Q9Y6F6 885 aa12.18□□□□□ -0.46
APOBEC3D-201ENST00000216099 DEXIO95424 95 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 LDHCP07864 332 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 IL1R1P14778 569 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 ME1P48163 572 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 CRACR2BQ8N4Y2 399 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 MRPS27Q92552 414 aaKnown RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 SLC26A6Q9BXS9 759 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 AATFQ9NY61 560 aaKnown RBP eCLIP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 USP17L21D6R901 530 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 PLSCR1O15162 318 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 SPTLC2O15270 562 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 DDAH1O94760 285 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 SNW1Q13573 536 aaKnown RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 CCDC144CPQ8IYA2 1237 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 FSIP1Q8NA03 581 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 AIFM3Q96NN9 605 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZKSCAN3Q9BRR0 538 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 CLIC4Q9Y696 253 aa12.17□□□□□ -0.46
APOBEC3D-201ENST00000216099 RBM6P78332 1123 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 SLC39A14Q15043 492 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 CAMK4Q16566 473 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 PPP6R2O75170 966 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 TERF1P54274 439 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 ECM1Q16610 540 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 SASS6Q6UVJ0 657 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 CAPN12Q6ZSI9 719 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 FMR1NBQ8N0W7 255 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 TSC1Q92574 1164 aa12.16□□□□□ -0.46
APOBEC3D-201ENST00000216099 CYP2D7A0A087X1C5 515 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 MOXD2PA6NHM9 499 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 UFL1O94874 794 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 BAG3O95817 575 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 MMP1P03956 469 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 USP5P45974 858 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 PDE4BQ07343 736 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 IFIT1BQ5T764 474 aaKnown RBP12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 JMYQ8N9B5 988 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 CD209Q9NNX6 404 aa12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 MAP3K20Q9NYL2 800 aaKnown RBP12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 NOL7Q9UMY1 257 aaKnown RBP12.15□□□□□ -0.46
APOBEC3D-201ENST00000216099 MROH7-TTC4A0A0A0MT08 1334 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms