RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Mex3cQ05A36 652 aaKnown RBP13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Pnpla2Q8BJ56 486 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ankrd49Q8VE42 238 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Filip1Q9CS72 1211 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Tmem191cQ9JJB1 302 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Trim21Q62191 470 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ebag9Q9D0V7 213 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Mtmr2Q9Z2D1 643 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Vwa3bJ9JI28 736 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Plcd3Q8K2J0 785 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Cd248Q91V98 765 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Irx4Q9QY61 515 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Gipc1Q9Z0G0 333 aa13.36□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Dnajc25A2ALW5 357 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Prr5lA2AVJ5 370 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 DnttP09838 530 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Tnnc2P20801 160 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ptgs1P22437 602 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 PsdQ5DTT2 1024 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ahcyl2Q68FL4 613 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ccdc169Q8BXX9 214 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Lonp1Q8CGK3 949 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 YarsQ91WQ3 528 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Tubgcp2Q921G8 905 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Stk32bQ9JJX8 414 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Mkrn1Q9QXP6 481 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 TnrQ8BYI9 1358 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 CaluO35887 315 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Diaph2O70566 1098 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Axin2O88566 840 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Idh1O88844 414 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Eef1dP57776 281 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Znf652Q5DU09 608 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Retreg2Q6NS82 541 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ripor2Q80U16 1078 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Cct8l1Q80YT3 562 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Bbs9Q811G0 885 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ppil4Q9CXG3 492 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ano9P86044 747 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Zbtb7bQ64321 544 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Atp1a2Q6PIE5 1020 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ankrd45Q810N6 248 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 C130026I21RikQ8C898 291 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Nrbp2Q91V36 499 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Gm1661E9Q963 441 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Copb2O55029 905 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 U2af2P26369 475 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 1700013D24RikQ0P521 120 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Nsun2Q1HFZ0 757 aaKnown RBP13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Wdr24Q8CFJ9 790 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 IqcdQ9D3V1 458 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Elf2Q9JHC9 593 aa13.35□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Pcdha4O88689 947 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Tmod1P49813 359 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 NyxP83503 476 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Golga1Q9CW79 758 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Trmt112Q9DCG9 125 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Scyl1Q9EQC5 806 aaKnown RBP13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Gm11549A0A286YD83 63 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Nup62clA2AG10 272 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Pcdhb9E9Q5G2 828 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 RilpQ5ND29 369 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Klhl7Q8BUL5 586 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Spats2Q8K1N4 545 aaKnown RBP13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Prss51A0A286YDY8 319 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ccdc78D3Z5T1 437 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 WaplQ65Z40 1200 aaKnown RBP13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Apol10aQ8CCA5 318 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Arhgap23Q69ZH9 1483 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Kif14L0N7N1 1674 aaKnown RBP13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Rsbn1lD3Z0K6 821 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Cd3dP04235 173 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Trpc6Q61143 930 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Rassf4Q8CB96 322 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Gtpbp10Q8K013 366 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Nos1Q9Z0J4 1429 aa13.34□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Otud7bB2RUR8 840 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ccdc13D3YV10 709 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Dnajc21E9Q8D0 531 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Myo1fP70248 1099 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Ppp2r5eQ61151 467 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Vps52Q8C754 723 aaKnown RBP13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Uggt1Q6P5E4 1551 aa13.33□□□□□ -0.27
Col8a1-201ENSMUST00000089332 Fgd5Q80UZ0 1219 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Usp14Q9JMA1 493 aaKnown RBP13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Plcb1Q9Z1B3 1216 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Lamc1P02468 1607 aaKnown RBP13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Gimd1E9PW74 217 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Sox13Q04891 613 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Ccdc114Q3UX62 658 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Syne3Q4FZC9 975 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Ccdc125Q5U465 500 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Anks6Q6GQX6 883 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Apol7cQ8C6E1 369 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Serpinb3bQ9D1Q5 387 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Ehd4Q9EQP2 541 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Tns3Q5SSZ5 1440 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Ccdc38Q8CDN8 563 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Tfap4Q9JIZ5 338 aa13.33□□□□□ -0.28
Col8a1-201ENSMUST00000089332 Aimp1P31230 310 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms