RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Zfp446Q8C9M8 523 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 4930550L24RikQ99PA7 320 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Mis12Q9CY25 206 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Znf704Q9ERQ3 566 aa20.82■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Nup153E9Q3G8 1462 aaKnown RBP20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Cops6O88545 324 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Hnrnph2P70333 449 aaKnown RBP20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Gjb4Q02738 266 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Serpinb6dQ3UWK8 375 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Kdm7aQ3UWM4 940 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Klra4Q60651 263 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Kdm1aQ6ZQ88 853 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Zkscan3Q91VW9 553 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Snx12O70493 165 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ddx3yQ62095 658 aaKnown RBP20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Usp15Q8R5H1 981 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 EpgnQ924X1 152 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 PplQ9R269 1755 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Nf2P46662 596 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Nlrp2Q4PLS0 1046 aaKnown RBP20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Madcam1Q61826 405 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 March6Q6ZQ89 909 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 MtrrQ8C1A3 696 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Mettl5Q8K1A0 209 aa20.81■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Gm1993A6X8I0 212 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 SlxD3Z347 212 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Tcp10bE9PYJ0 438 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Smarca1Q6PGB8 1046 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Vipas39Q8BGQ1 491 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ufl1Q8CCJ3 793 aaKnown RBP20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ttc13A0A1L1SSC7 844 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Mx1P09922 631 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Stim2P83093 746 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Atp8a2P98200 1148 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Rasal3Q8C2K5 1041 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Sgpp1Q9JI99 430 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Klhl7Q8BUL5 586 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Alx1Q8C8B0 326 aa20.8■□□□□ 0.92
Ubp1-201ENSMUST00000009885 PnocQ64387 187 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Slc44a1Q6X893 653 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Baiap3Q80TT2 1134 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Terb1Q8C0V1 768 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ccdc105Q9D4K7 499 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Sec31aQ3UPL0 1230 aaKnown RBP20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Tldc1Q8K0P3 455 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Q8VDP2 222 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Farp2Q91VS8 1065 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 1700013D24RikQ0P521 120 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 RarsQ9D0I9 660 aaKnown RBP20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Ube3bQ9ES34 1070 aa20.79■□□□□ 0.92
Ubp1-201ENSMUST00000009885 AK157302I3ITR1 129 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Mdh1bQ5F204 500 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Wdr44Q6NVE8 915 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Isca1Q9D924 129 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 GpiP06745 558 aaKnown RBP20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Tdo2P48776 406 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Clul1Q3ZRW6 464 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 RragaQ80X95 313 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Fermt2Q8CIB5 680 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Krt24A1L317 512 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Eftud2O08810 971 aaKnown RBP20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Slc30a9Q5IRJ6 567 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 BcrQ6PAJ1 1270 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Trim52Q8CDV4 233 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Col20a1Q923P0 1320 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Itsn1Q9Z0R4 1714 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Map2P20357 1828 aa20.78■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Speer4dL7N216 212 aa20.77■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Phf8Q80TJ7 1023 aa20.77■□□□□ 0.92
Ubp1-201ENSMUST00000009885 CutaQ9CQ89 177 aa20.77■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Plekho1Q9JIY0 408 aa20.77■□□□□ 0.92
Ubp1-201ENSMUST00000009885 Opa1P58281 960 aa20.77■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Npdc1Q64322 332 aa20.77■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Spats2Q8K1N4 545 aaKnown RBP20.77■□□□□ 0.91
Ubp1-201ENSMUST00000009885 ApobrQ8VBT6 942 aa20.77■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cyp3a25O09158 503 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 SncbQ91ZZ3 133 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ppil4Q9CXG3 492 aaKnown RBP20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 2310002L09RikQ9D7L5 217 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Akap8Q9DBR0 687 aaKnown RBP20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Col16a1Q8BLX7 1580 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Chd2E9PZM4 1827 aaKnown RBP20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Psmd14O35593 310 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Traf3ip1Q149C2 625 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Hook2Q7TMK6 716 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Arfgef2A2A5R2 1792 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Clcn6O35454 870 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cep95Q8BVV7 827 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Grin3bQ91ZU9 1003 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Fam173bQ9D1Z3 247 aa20.76■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Ddx23D3Z0M9 819 aaKnown RBP20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cacna2d1O08532 1103 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 RaraP11416 462 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Wnt7aP24383 349 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Cyp24a1Q64441 514 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gpbp1Q6NXH3 473 aaKnown RBP20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Gga3Q8BMI3 718 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Tmem63cQ8CBX0 802 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Calml3Q9D6P8 149 aa20.75■□□□□ 0.91
Ubp1-201ENSMUST00000009885 Pde8bE9Q4S1 865 aa20.75■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms