RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 AAD4Q07747 329 aa0.2□□□□□ -2.38
snR50snR50 TRE2Q08693 809 aa0.2□□□□□ -2.38
snR50snR50 HFI1Q12060 488 aa0.2□□□□□ -2.38
snR50snR50 TMS1Q12116 473 aa0.2□□□□□ -2.38
snR50snR50 YOL098CQ12496 1037 aa0.2□□□□□ -2.38
snR50snR50 FAB1P34756 2278 aa0.19□□□□□ -2.38
snR50snR50 YER145C-AA0A023PYF4 145 aa0.19□□□□□ -2.38
snR50snR50 HHF1P02309 103 aaKnown RBP0.19□□□□□ -2.38
snR50snR50 CLN3P13365 580 aa0.19□□□□□ -2.38
snR50snR50 PDE1P22434 369 aa0.19□□□□□ -2.38
snR50snR50 RVS161P25343 265 aaKnown RBP0.19□□□□□ -2.38
snR50snR50 RER1P25560 188 aa0.19□□□□□ -2.38
snR50snR50 MSH2P25847 964 aa0.19□□□□□ -2.38
snR50snR50 PAH1P32567 862 aa0.19□□□□□ -2.38
snR50snR50 HXT6P39003 570 aaKnown RBP0.19□□□□□ -2.38
snR50snR50 HXT7P39004 570 aa0.19□□□□□ -2.38
snR50snR50 PHO90P39535 881 aa0.19□□□□□ -2.38
snR50snR50 YPS6P40583 537 aa0.19□□□□□ -2.38
snR50snR50 HXT9P40885 567 aa0.19□□□□□ -2.38
snR50snR50 SNG1P46950 547 aa0.19□□□□□ -2.38
snR50snR50 UBX6P47049 396 aa0.19□□□□□ -2.38
snR50snR50 NPA3P47122 385 aa0.19□□□□□ -2.38
snR50snR50 SGF73P53165 657 aa0.19□□□□□ -2.38
snR50snR50 ELP3Q02908 557 aaKnown RBP0.19□□□□□ -2.38
snR50snR50 YLR001CQ07895 862 aa0.19□□□□□ -2.38
snR50snR50 CDC45Q08032 650 aa0.19□□□□□ -2.38
snR50snR50 YLR049CQ12110 428 aa0.19□□□□□ -2.38
snR50snR50 AYT1Q12226 474 aa0.19□□□□□ -2.38
snR50snR50 INP53Q12271 1107 aa0.19□□□□□ -2.38
snR50snR50 PRM7Q12459 698 aa0.19□□□□□ -2.38
snR50snR50 ARP6Q12509 438 aa0.19□□□□□ -2.38
snR50snR50 HEM2P05373 342 aa0.18□□□□□ -2.38
snR50snR50 RPL20AP0CX23 172 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 RPL20BP0CX24 172 aaPredicted RBP0.18□□□□□ -2.38
snR50snR50 KRS1P15180 591 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 RPB8P20436 146 aa0.18□□□□□ -2.38
snR50snR50 CLB2P24869 491 aa0.18□□□□□ -2.38
snR50snR50 GAC1P28006 793 aa0.18□□□□□ -2.38
snR50snR50 IME2P32581 645 aa0.18□□□□□ -2.38
snR50snR50 PMU1P36069 295 aa0.18□□□□□ -2.38
snR50snR50 MTC4P38335 694 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 SRP68P38687 599 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 NDT80P38830 627 aa0.18□□□□□ -2.38
snR50snR50 MGS1P40151 587 aa0.18□□□□□ -2.38
snR50snR50 TMA108P40462 946 aa0.18□□□□□ -2.38
snR50snR50 MDR1P53258 950 aa0.18□□□□□ -2.38
snR50snR50 TDA7P53882 636 aaPredicted RBP0.18□□□□□ -2.38
snR50snR50 NUP100Q02629 959 aa0.18□□□□□ -2.38
snR50snR50 VPS64Q03944 604 aa0.18□□□□□ -2.38
snR50snR50 BAG7Q12128 409 aa0.18□□□□□ -2.38
snR50snR50 WTM1Q12363 437 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 RPS21BQ3E754 87 aaKnown RBP0.18□□□□□ -2.38
snR50snR50 EDE1P34216 1381 aa0.18□□□□□ -2.38
snR50snR50 SAL1D6W196 494 aa0.17□□□□□ -2.38
snR50snR50 ADH2P00331 348 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 SUI3P09064 285 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 LPD1P09624 499 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 ERR1P0CX10 437 aa0.17□□□□□ -2.38
snR50snR50 ERR2P0CX11 437 aa0.17□□□□□ -2.38
snR50snR50 STI1P15705 589 aaKnown RBP RIP-Chip data0.17□□□□□ -2.38not detected
snR50snR50 TYR1P20049 452 aa0.17□□□□□ -2.38
snR50snR50 PCL1P24867 279 aa0.17□□□□□ -2.38
snR50snR50 ACH1P32316 526 aa0.17□□□□□ -2.38
snR50snR50 SAC1P32368 623 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 HXT4P32467 576 aa0.17□□□□□ -2.38
snR50snR50 PTR2P32901 601 aa0.17□□□□□ -2.38
snR50snR50 SIP2P34164 415 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 PHD1P36093 366 aa0.17□□□□□ -2.38
snR50snR50 TUL1P36096 758 aa0.17□□□□□ -2.38
snR50snR50 FAT1P38225 669 aa0.17□□□□□ -2.38
snR50snR50 CKB2P38930 258 aa0.17□□□□□ -2.38
snR50snR50 FUN12P39730 1002 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 SSP120P39931 234 aaKnown RBP0.17□□□□□ -2.38
snR50snR50 IRC5P43610 853 aa0.17□□□□□ -2.38
snR50snR50 MSY1P48527 492 aa0.17□□□□□ -2.38
snR50snR50 YGL082WP53155 381 aa0.17□□□□□ -2.38
snR50snR50 BSC5P53755 489 aa0.17□□□□□ -2.38
snR50snR50 YNL034WP53963 612 aa0.17□□□□□ -2.38
snR50snR50 ECM9Q02202 377 aa0.17□□□□□ -2.38
snR50snR50 RSN1Q03516 953 aa0.17□□□□□ -2.38
snR50snR50 VHS1Q03785 461 aa0.17□□□□□ -2.38
snR50snR50 MSS11Q03825 758 aa0.17□□□□□ -2.38
snR50snR50 ECM11Q04110 302 aa0.17□□□□□ -2.38
snR50snR50 RBA50Q04418 439 aa0.17□□□□□ -2.38
snR50snR50 GTB1Q04924 702 aa0.17□□□□□ -2.38
snR50snR50 ENT4Q07872 247 aa0.17□□□□□ -2.38
snR50snR50 COX1P00401 534 aa0.16□□□□□ -2.38
snR50snR50 PCT1P13259 424 aa0.16□□□□□ -2.38
snR50snR50 RNA14P25298 677 aaKnown RBP0.16□□□□□ -2.38
snR50snR50 CDC60P26637 1090 aaKnown RBP0.16□□□□□ -2.38
snR50snR50 FUN19P28003 413 aaPredicted RBP0.16□□□□□ -2.38
snR50snR50 CBF2P32504 956 aa0.16□□□□□ -2.38
snR50snR50 YNK1P36010 153 aaKnown RBP0.16□□□□□ -2.38
snR50snR50 DID4P36108 232 aa0.16□□□□□ -2.38
snR50snR50 YGP1P38616 354 aaKnown RBP0.16□□□□□ -2.38
snR50snR50 NMD2P38798 1089 aaKnown RBP0.16□□□□□ -2.38
snR50snR50 YHR131CP38835 850 aa0.16□□□□□ -2.38
snR50snR50 EMP65P40085 556 aa0.16□□□□□ -2.38
snR50snR50 MNT2P53059 558 aa0.16□□□□□ -2.38
snR50snR50 PTA1Q01329 785 aaPredicted RBP0.16□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms