RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B YNR071CP53757 342 aa0.79□□□□□ -2.28
snR39BsnR39B TMA64Q04600 565 aaKnown RBP0.79□□□□□ -2.28
snR39BsnR39B GRC3Q07845 632 aa0.79□□□□□ -2.28
snR39BsnR39B RPB8P20436 146 aa0.78□□□□□ -2.28
snR39BsnR39B ATS1P31386 333 aa0.78□□□□□ -2.28
snR39BsnR39B DAL3P32459 195 aa0.78□□□□□ -2.28
snR39BsnR39B YME1P32795 747 aa0.78□□□□□ -2.28
snR39BsnR39B PAD1P33751 242 aaKnown RBP RIP-Chip data0.78□□□□□ -2.28not detected
snR39BsnR39B HCS1P34243 683 aa0.78□□□□□ -2.28
snR39BsnR39B MID2P36027 376 aa0.78□□□□□ -2.28
snR39BsnR39B STV1P37296 890 aa0.78□□□□□ -2.28
snR39BsnR39B EAF5P39995 279 aa0.78□□□□□ -2.28
snR39BsnR39B RPT2P40327 437 aaKnown RBP0.78□□□□□ -2.28
snR39BsnR39B HXT9P40885 567 aa0.78□□□□□ -2.28
snR39BsnR39B YGR210CP42942 411 aa0.78□□□□□ -2.28
snR39BsnR39B YFR016CP43597 1233 aaKnown RBP0.78□□□□□ -2.28
snR39BsnR39B OSW7P43611 510 aa0.78□□□□□ -2.28
snR39BsnR39B RTT101P47050 842 aa0.78□□□□□ -2.28
snR39BsnR39B SGF73P53165 657 aa0.78□□□□□ -2.28
snR39BsnR39B MOT3P54785 490 aaKnown RBP0.78□□□□□ -2.28
snR39BsnR39B RPM2Q02773 1202 aa0.78□□□□□ -2.28
snR39BsnR39B TRS31Q03337 283 aa0.78□□□□□ -2.28
snR39BsnR39B YDR109CQ04585 715 aa0.78□□□□□ -2.28
snR39BsnR39B TRI1Q05024 226 aa0.78□□□□□ -2.28
snR39BsnR39B RRP12Q12754 1228 aaKnown RBP0.78□□□□□ -2.28
snR39BsnR39B COX1P00401 534 aa0.77□□□□□ -2.29
snR39BsnR39B SPT15P13393 240 aaKnown RBP0.77□□□□□ -2.29
snR39BsnR39B PMR1P13586 950 aa0.77□□□□□ -2.29
snR39BsnR39B KRS1P15180 591 aaKnown RBP0.77□□□□□ -2.29
snR39BsnR39B STE50P25344 346 aa0.77□□□□□ -2.29
snR39BsnR39B YTA12P40341 825 aa0.77□□□□□ -2.29
snR39BsnR39B GUF1P46943 645 aa0.77□□□□□ -2.29
snR39BsnR39B TIS11P47977 285 aa0.77□□□□□ -2.29
snR39BsnR39B NOP7P53261 605 aaKnown RBP0.77□□□□□ -2.29
snR39BsnR39B BAG7Q12128 409 aa0.77□□□□□ -2.29
snR39BsnR39B EDE1P34216 1381 aa0.77□□□□□ -2.29
snR39BsnR39B CHO1P08456 276 aa0.76□□□□□ -2.29
snR39BsnR39B PCT1P13259 424 aa0.76□□□□□ -2.29
snR39BsnR39B DEG1P31115 442 aaKnown RBP0.76□□□□□ -2.29
snR39BsnR39B OCA5P38738 679 aa0.76□□□□□ -2.29
snR39BsnR39B YER130CP39959 443 aa0.76□□□□□ -2.29
snR39BsnR39B EMP65P40085 556 aa0.76□□□□□ -2.29
snR39BsnR39B HLJ1P48353 224 aa0.76□□□□□ -2.29
snR39BsnR39B GPG1P53130 126 aa0.76□□□□□ -2.29
snR39BsnR39B ATG21Q02887 496 aa0.76□□□□□ -2.29
snR39BsnR39B VPS64Q03944 604 aa0.76□□□□□ -2.29
snR39BsnR39B STP3Q05937 343 aa0.76□□□□□ -2.29
snR39BsnR39B CSR1Q06705 408 aaKnown RBP0.76□□□□□ -2.29
snR39BsnR39B ARP6Q12509 438 aa0.76□□□□□ -2.29
snR39BsnR39B BI3Q9ZZW7 517 aa0.76□□□□□ -2.29
snR39BsnR39B MRC1P25588 1096 aa0.75□□□□□ -2.29
snR39BsnR39B SAC1P32368 623 aaKnown RBP0.75□□□□□ -2.29
snR39BsnR39B NDC1P32500 655 aa0.75□□□□□ -2.29
snR39BsnR39B SAC6P32599 642 aaKnown RBP0.75□□□□□ -2.29
snR39BsnR39B TAF5P38129 798 aa0.75□□□□□ -2.29
snR39BsnR39B DJP1P40564 432 aa0.75□□□□□ -2.29
snR39BsnR39B GPP1P41277 250 aaKnown RBP0.75□□□□□ -2.29
snR39BsnR39B POL31P46957 487 aa0.75□□□□□ -2.29
snR39BsnR39B MSY1P48527 492 aa0.75□□□□□ -2.29
snR39BsnR39B HOL1P53389 586 aa0.75□□□□□ -2.29
snR39BsnR39B TDA7P53882 636 aaPredicted RBP0.75□□□□□ -2.29
snR39BsnR39B PFA5Q03289 374 aa0.75□□□□□ -2.29
snR39BsnR39B SKY1Q03656 742 aa0.75□□□□□ -2.29
snR39BsnR39B GTB1Q04924 702 aa0.75□□□□□ -2.29
snR39BsnR39B THI73Q07904 523 aa0.75□□□□□ -2.29
snR39BsnR39B YPR027CQ12079 277 aa0.75□□□□□ -2.29
snR39BsnR39B RVB2Q12464 471 aaKnown RBP0.75□□□□□ -2.29
snR39BsnR39B ISY1P21374 235 aaPredicted RBP0.74□□□□□ -2.29
snR39BsnR39B SPC110P32380 944 aa0.74□□□□□ -2.29
snR39BsnR39B PTR2P32901 601 aa0.74□□□□□ -2.29
snR39BsnR39B YBL059WP34224 193 aa0.74□□□□□ -2.29
snR39BsnR39B YKL097CP34245 136 aa0.74□□□□□ -2.29
snR39BsnR39B SPC34P36131 295 aa0.74□□□□□ -2.29
snR39BsnR39B RFS1P38234 210 aaKnown RBP0.74□□□□□ -2.29
snR39BsnR39B RFC1P38630 861 aaKnown RBP0.74□□□□□ -2.29
snR39BsnR39B STL1P39932 569 aa0.74□□□□□ -2.29
snR39BsnR39B RPR2P40571 144 aa0.74□□□□□ -2.29
snR39BsnR39B YGR079WP53249 370 aa0.74□□□□□ -2.29
snR39BsnR39B DCP2P53550 970 aaKnown RBP0.74□□□□□ -2.29
snR39BsnR39B YNL034WP53963 612 aa0.74□□□□□ -2.29
snR39BsnR39B YMR027WQ04371 470 aa0.74□□□□□ -2.29
snR39BsnR39B CRD1Q07560 283 aa0.74□□□□□ -2.29
snR39BsnR39B YDL218WQ07629 317 aa0.74□□□□□ -2.29
snR39BsnR39B CDC45Q08032 650 aa0.74□□□□□ -2.29
snR39BsnR39B HNT3Q08702 217 aa0.74□□□□□ -2.29
snR39BsnR39B RRG7Q08774 242 aaPredicted RBP0.74□□□□□ -2.29
snR39BsnR39B CWC2Q12046 339 aaPredicted RBP0.74□□□□□ -2.29
snR39BsnR39B YCL021W-AQ96VH3 125 aa0.74□□□□□ -2.29
snR39BsnR39B NOP14Q99207 810 aaKnown RBP0.74□□□□□ -2.29
snR39BsnR39B HHF1P02309 103 aaKnown RBP0.73□□□□□ -2.29
snR39BsnR39B RPL20AP0CX23 172 aaKnown RBP0.73□□□□□ -2.29
snR39BsnR39B RPL20BP0CX24 172 aaPredicted RBP0.73□□□□□ -2.29
snR39BsnR39B RAP1P11938 827 aa0.73□□□□□ -2.29
snR39BsnR39B TKL1P23254 680 aaKnown RBP0.73□□□□□ -2.29
snR39BsnR39B CLB2P24869 491 aa0.73□□□□□ -2.29
snR39BsnR39B YSP3P25036 478 aa0.73□□□□□ -2.29
snR39BsnR39B RPS7AP26786 190 aaKnown RBP0.73□□□□□ -2.29
snR39BsnR39B ARO2P28777 376 aaKnown RBP0.73□□□□□ -2.29
snR39BsnR39B PHD1P36093 366 aa0.73□□□□□ -2.29
snR39BsnR39B MRP21P38175 177 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms