RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR17b	snR17b	DOT1	Q04089	582 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	PEX10	Q05568	337 aa		4.85	□□□□□ -1.63
snR17b	snR17b	YPR196W	Q06595	470 aa		4.85	□□□□□ -1.63
snR17b	snR17b	YOL159C	Q08300	171 aa		4.85	□□□□□ -1.63
snR17b	snR17b	IES4	Q08561	116 aa		4.85	□□□□□ -1.63
snR17b	snR17b	ESA1	Q08649	445 aa		4.85	□□□□□ -1.63
snR17b	snR17b	NSL1	Q12143	216 aa		4.85	□□□□□ -1.63
snR17b	snR17b	RRG1	Q12167	365 aa	Predicted RBP	4.85	□□□□□ -1.63
snR17b	snR17b	TY3A-G	Q12173	290 aa		4.85	□□□□□ -1.63
snR17b	snR17b	REC8	Q12188	680 aa		4.85	□□□□□ -1.63
snR17b	snR17b	HSP42	Q12329	375 aa		4.85	□□□□□ -1.63
snR17b	snR17b	CMR1	Q12510	522 aa	Known RBP	4.85	□□□□□ -1.63
snR17b	snR17b	PCD1	Q12524	340 aa		4.85	□□□□□ -1.63
snR17b	snR17b	TY3A-I	Q99219	290 aa		4.85	□□□□□ -1.63
snR17b	snR17b	MED11	Q99278	115 aa		4.85	□□□□□ -1.63
snR17b	snR17b	TPK1	P06244	397 aa		4.84	□□□□□ -1.63
snR17b	snR17b	HIS3	P06633	220 aa		4.84	□□□□□ -1.63
snR17b	snR17b	DED1	P06634	604 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	ERG12	P07277	443 aa		4.84	□□□□□ -1.63
snR17b	snR17b	STF2	P16965	84 aa		4.84	□□□□□ -1.63
snR17b	snR17b	AMD2	P22580	549 aa		4.84	□□□□□ -1.63
snR17b	snR17b	ERG6	P25087	383 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	DMC1	P25453	334 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YCL068C	P25593	260 aa		4.84	□□□□□ -1.63
snR17b	snR17b	PEX3	P28795	441 aa		4.84	□□□□□ -1.63
snR17b	snR17b	CRM1	P30822	1084 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	RIM1	P32445	135 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	MEI5	P32489	222 aa		4.84	□□□□□ -1.63
snR17b	snR17b	PRP19	P32523	503 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	UTR2	P32623	467 aa		4.84	□□□□□ -1.63
snR17b	snR17b	RGT1	P32862	1170 aa		4.84	□□□□□ -1.63
snR17b	snR17b	ASK1	P35734	292 aa		4.84	□□□□□ -1.63
snR17b	snR17b	UTP30	P36144	274 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	YBR241C	P38142	488 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YBL029W	P38201	376 aa		4.84	□□□□□ -1.63
snR17b	snR17b	IST2	P38250	946 aa		4.84	□□□□□ -1.63
snR17b	snR17b	GUA1	P38625	525 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	YHR078W	P38799	552 aa		4.84	□□□□□ -1.63
snR17b	snR17b	THO1	P40040	218 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	PAC11	P40960	533 aa		4.84	□□□□□ -1.63
snR17b	snR17b	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
snR17b	snR17b	MET12	P46151	657 aa		4.84	□□□□□ -1.63
snR17b	snR17b	GLG2	P47011	380 aa		4.84	□□□□□ -1.63
snR17b	snR17b	RTT101	P47050	842 aa		4.84	□□□□□ -1.63
snR17b	snR17b	LYS4	P49367	693 aa	Predicted RBP	4.84	□□□□□ -1.63
snR17b	snR17b	CWC23	P52868	283 aa	Predicted RBP	4.84	□□□□□ -1.63
snR17b	snR17b	TWF1	P53250	332 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YNL146W	P53906	100 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YNL108C	P53929	270 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YNL095C	P53932	642 aa		4.84	□□□□□ -1.63
snR17b	snR17b	ECM9	Q02202	377 aa		4.84	□□□□□ -1.63
snR17b	snR17b	CDC123	Q05791	360 aa		4.84	□□□□□ -1.63
snR17b	snR17b	MCP2	Q06567	569 aa		4.84	□□□□□ -1.63
snR17b	snR17b	HDA3	Q06623	655 aa		4.84	□□□□□ -1.63
snR17b	snR17b	SYO1	Q07395	620 aa		4.84	□□□□□ -1.63
snR17b	snR17b	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
snR17b	snR17b	NGL1	Q08213	363 aa	Known RBP	4.84	□□□□□ -1.63
snR17b	snR17b	DNL4	Q08387	944 aa	Predicted RBP	4.84	□□□□□ -1.63
snR17b	snR17b	SGT1	Q08446	395 aa		4.84	□□□□□ -1.63
snR17b	snR17b	ATG29	Q12092	213 aa		4.84	□□□□□ -1.63
snR17b	snR17b	OSW2	Q12202	724 aa		4.84	□□□□□ -1.63
snR17b	snR17b	DCP1	Q12517	231 aa	Predicted RBP	4.84	□□□□□ -1.63
snR17b	snR17b	IZH4	Q99393	312 aa		4.84	□□□□□ -1.63
snR17b	snR17b	PMD1	P32634	1753 aa		4.83	□□□□□ -1.64
snR17b	snR17b	COX6	P00427	148 aa		4.83	□□□□□ -1.64
snR17b	snR17b	GPM1	P00950	247 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	TOP3	P13099	656 aa		4.83	□□□□□ -1.64
snR17b	snR17b	MET16	P18408	261 aa	Predicted RBP	4.83	□□□□□ -1.64
snR17b	snR17b	PHO3	P24031	467 aa		4.83	□□□□□ -1.64
snR17b	snR17b	GCD11	P32481	527 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	BEM3	P32873	1128 aa		4.83	□□□□□ -1.64
snR17b	snR17b	SMY2	P32909	740 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	TGL1	P34163	548 aa		4.83	□□□□□ -1.64
snR17b	snR17b	TOM20	P35180	183 aa		4.83	□□□□□ -1.64
snR17b	snR17b	SPC34	P36131	295 aa		4.83	□□□□□ -1.64
snR17b	snR17b	ATG14	P38270	344 aa		4.83	□□□□□ -1.64
snR17b	snR17b	SLX1	P38324	304 aa		4.83	□□□□□ -1.64
snR17b	snR17b	RIM11	P38615	370 aa		4.83	□□□□□ -1.64
snR17b	snR17b	YHL012W	P38709	493 aa		4.83	□□□□□ -1.64
snR17b	snR17b	YHI9	P38765	294 aa		4.83	□□□□□ -1.64
snR17b	snR17b	FAD1	P38913	306 aa		4.83	□□□□□ -1.64
snR17b	snR17b	DSS1	P39112	969 aa		4.83	□□□□□ -1.64
snR17b	snR17b	CEM1	P39525	442 aa		4.83	□□□□□ -1.64
snR17b	snR17b	YHB1	P39676	399 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	GPB2	P39717	880 aa		4.83	□□□□□ -1.64
snR17b	snR17b	YAT2	P40017	923 aa		4.83	□□□□□ -1.64
snR17b	snR17b	JLP2	P40206	208 aa		4.83	□□□□□ -1.64
snR17b	snR17b	RPT2	P40327	437 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	MND2	P40577	368 aa		4.83	□□□□□ -1.64
snR17b	snR17b	IMA5	P40884	581 aa		4.83	□□□□□ -1.64
snR17b	snR17b	VMA13	P41807	478 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	FET5	P43561	622 aa		4.83	□□□□□ -1.64
snR17b	snR17b	HAM1	P47119	197 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	IMA1	P53051	589 aa		4.83	□□□□□ -1.64
snR17b	snR17b	MTC3	P53077	123 aa		4.83	□□□□□ -1.64
snR17b	snR17b	SLD3	P53135	668 aa		4.83	□□□□□ -1.64
snR17b	snR17b	CUL3	P53202	744 aa		4.83	□□□□□ -1.64
snR17b	snR17b	YGR283C	P53336	341 aa	Predicted RBP	4.83	□□□□□ -1.64
snR17b	snR17b	NOG1	Q02892	647 aa	Known RBP	4.83	□□□□□ -1.64
snR17b	snR17b	SLD5	Q03406	294 aa		4.83	□□□□□ -1.64

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