RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	YGL260W	P53056	76 aa		2.62	□□□□□ -1.99
YPR039W	YPR039W	ARC35	P53731	342 aa	Known RBP	2.62	□□□□□ -1.99
YPR039W	YPR039W	CSL4	P53859	292 aa	Predicted RBP	2.62	□□□□□ -1.99
YPR039W	YPR039W	CAC2	Q04199	468 aa		2.62	□□□□□ -1.99
YPR039W	YPR039W	ECM16	Q04217	1267 aa	Known RBP	2.62	□□□□□ -1.99
YPR039W	YPR039W	CIA1	Q05583	330 aa		2.62	□□□□□ -1.99
YPR039W	YPR039W	BLS1	Q06071	122 aa		2.62	□□□□□ -1.99
YPR039W	YPR039W	POS5	Q06892	414 aa		2.62	□□□□□ -1.99
YPR039W	YPR039W	TPK1	P06244	397 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	YFL068W	P0CX99	160 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	YLL066W-A	P0CY00	160 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	YLL067W-A	P0CY01	160 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	MTF2	P10849	440 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	SRP54	P20424	541 aa	Known RBP	2.61	□□□□□ -1.99
YPR039W	YPR039W	PCL6	P40038	420 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	MRX1	P40050	688 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	COG1	P53079	417 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	PFA5	Q03289	374 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	IZH1	Q03419	316 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	ECI1	Q05871	280 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	CRN1	Q06440	651 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	TMA16	Q08687	178 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	PCD1	Q12524	340 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	YOR111W	Q99210	232 aa		2.61	□□□□□ -1.99
YPR039W	YPR039W	TY2A-LR1	P0C2J4	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-F	P0CX61	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-GR2	P0CX62	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	UBC1	P21734	215 aa	Known RBP	2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-C	P25383	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	RAD16	P31244	790 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	DBF20	P32328	564 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	SOF1	P33750	489 aa	Known RBP	2.6	□□□□□ -1.99
YPR039W	YPR039W	TFC3	P34111	1160 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	AAP1	P37898	856 aa	Known RBP	2.6	□□□□□ -1.99
YPR039W	YPR039W	MNN2	P38069	597 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	SMK1	P41808	388 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-DR2	Q03483	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	GRS2	Q06817	618 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-B	Q12260	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-OR2	Q12293	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-DR1	Q12392	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-OR1	Q12439	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	ERG27	Q12452	347 aa	Known RBP	2.6	□□□□□ -1.99
YPR039W	YPR039W	TY2A-DR3	Q99303	438 aa		2.6	□□□□□ -1.99
YPR039W	YPR039W	PHO2	P07269	559 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	CHO1	P08456	276 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	PET111	P08468	800 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	TKL1	P23254	680 aa	Known RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	STE50	P25344	346 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	PTH2	P34222	208 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	NTR2	P36118	322 aa	Predicted RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	IFA38	P38286	347 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	SEC31	P38968	1273 aa	Known RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	VRG4	P40107	337 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	IST3	P40565	148 aa	Predicted RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	SWP82	P43554	623 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	CTK2	P46962	323 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	HOS2	P53096	452 aa	Predicted RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	ASI1	P54074	624 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	FCP1	Q03254	732 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	SCW10	Q04951	389 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	ARP9	Q05123	467 aa		2.59	□□□□□ -1.99
YPR039W	YPR039W	CSR1	Q06705	408 aa	Known RBP	2.59	□□□□□ -1.99
YPR039W	YPR039W	CBP1	P07252	654 aa		2.58	□□□□□ -2
YPR039W	YPR039W	SRB5	P32585	307 aa		2.58	□□□□□ -2
YPR039W	YPR039W	XRS2	P33301	854 aa		2.58	□□□□□ -2
YPR039W	YPR039W	ECM10	P39987	644 aa		2.58	□□□□□ -2
YPR039W	YPR039W	RPN11	P43588	306 aa	Known RBP	2.58	□□□□□ -2
YPR039W	YPR039W	YJR008W	P47085	338 aa		2.58	□□□□□ -2
YPR039W	YPR039W	ESBP6	P53918	673 aa		2.58	□□□□□ -2
YPR039W	YPR039W	BET4	Q00618	327 aa		2.58	□□□□□ -2
YPR039W	YPR039W	RSM28	Q03430	361 aa		2.58	□□□□□ -2
YPR039W	YPR039W	YLR281C	Q05863	155 aa		2.58	□□□□□ -2
YPR039W	YPR039W	UTP21	Q06078	939 aa	Predicted RBP	2.58	□□□□□ -2
YPR039W	YPR039W	MCP2	Q06567	569 aa		2.58	□□□□□ -2
YPR039W	YPR039W	GPN2	Q08726	347 aa	Predicted RBP	2.58	□□□□□ -2
YPR039W	YPR039W	RAP1	P11938	827 aa		2.57	□□□□□ -2
YPR039W	YPR039W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
YPR039W	YPR039W	CDC15	P27636	974 aa		2.57	□□□□□ -2
YPR039W	YPR039W	SAC1	P32368	623 aa	Known RBP	2.57	□□□□□ -2
YPR039W	YPR039W	TEF4	P36008	412 aa	Known RBP	2.57	□□□□□ -2
YPR039W	YPR039W	FMP46	P36141	133 aa	Known RBP	2.57	□□□□□ -2
YPR039W	YPR039W	RKM3	P38222	552 aa		2.57	□□□□□ -2
YPR039W	YPR039W	LEU5	P38702	357 aa		2.57	□□□□□ -2
YPR039W	YPR039W	UME6	P39001	836 aa		2.57	□□□□□ -2
YPR039W	YPR039W	TPM2	P40414	161 aa		2.57	□□□□□ -2
YPR039W	YPR039W	PFK26	P40433	827 aa	Known RBP	2.57	□□□□□ -2
YPR039W	YPR039W	SAD1	P43589	448 aa		2.57	□□□□□ -2
YPR039W	YPR039W	CTF18	P49956	741 aa		2.57	□□□□□ -2
YPR039W	YPR039W	PSP1	P50896	841 aa	Known RBP	2.57	□□□□□ -2
YPR039W	YPR039W	YNL234W	P53857	426 aa		2.57	□□□□□ -2
YPR039W	YPR039W	YNL181W	P53878	407 aa		2.57	□□□□□ -2
YPR039W	YPR039W	ARP10	Q04549	284 aa		2.57	□□□□□ -2
YPR039W	YPR039W	YMR317W	Q04893	1140 aa		2.57	□□□□□ -2
YPR039W	YPR039W	TFC6	Q06339	672 aa		2.57	□□□□□ -2
YPR039W	YPR039W	YMR230W-A	Q3E7B5	62 aa		2.57	□□□□□ -2
YPR039W	YPR039W	YND1	P40009	630 aa		2.56	□□□□□ -2
YPR039W	YPR039W	SAP185	P40856	1058 aa		2.56	□□□□□ -2
YPR039W	YPR039W	YFR020W	P43600	232 aa		2.56	□□□□□ -2
YPR039W	YPR039W	IML2	P47031	731 aa		2.56	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms