RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	SCO2	P38072	301 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	EDS1	P38073	919 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	RFC3	P38629	340 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ORC6	P38826	435 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	YDR089W	P38966	869 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	GIP4	P39732	760 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	TPA1	P40032	644 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	MMF1	P40185	145 aa	Known RBP	4.09	□□□□□ -1.76
HOS3	YPL116W	RGI2	P40188	164 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ATM1	P40416	690 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	NAS2	P40555	220 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	EPS1	P40557	701 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	YAP5	P40574	245 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	THI12	P42883	340 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	THI5	P43534	340 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	YFL034W	P43564	1073 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	RFX1	P48743	811 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ROM1	P53046	1155 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ERP6	P53198	216 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	YGR042W	P53227	271 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	TUB4	P53378	473 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	MEP3	P53390	489 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	MMT1	Q03218	510 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	NHX1	Q04121	633 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	RCO1	Q04779	684 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	SPH1	Q06160	661 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ATG20	Q07528	640 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	THI13	Q07748	340 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	GPI13	Q07830	1017 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	NCA2	Q12374	616 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	FRE6	Q12473	712 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	MTR10	Q99189	972 aa		4.09	□□□□□ -1.76
HOS3	YPL116W	ATP6	P00854	259 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	ENO2	P00925	437 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	GAL4	P04386	881 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	RAD1	P06777	1100 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	CYT1	P07143	309 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	SAN1	P22470	610 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	CMK2	P22517	447 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	GSH1	P32477	678 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	SRP101	P32916	621 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	YKR015C	P36111	568 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	POA1	P38218	177 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	SEN34	P39707	275 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	PAC1	P39946	494 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	SCC4	P40090	624 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	MSS2	P40990	351 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	IDS2	P46958	469 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	CCC1	P47818	322 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	RPS7B	P48164	190 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	YGR237C	P50089	785 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	DAM1	P53267	343 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	PBP1	P53297	722 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	YGR250C	P53316	781 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	MRPL19	P53875	158 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	ADE16	P54113	591 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	RMT2	Q03305	412 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	YDR239C	Q03780	787 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	BOP2	Q06150	570 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	YLR271W	Q06152	274 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	YLR173W	Q06247	608 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	BCP1	Q06338	283 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	YAP7	Q08182	245 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	TMA16	Q08687	178 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	GUP2	Q08929	609 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
HOS3	YPL116W	NTO1	Q12311	748 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	PAR32	Q12515	295 aa	Known RBP	4.08	□□□□□ -1.76
HOS3	YPL116W	BNR1	P40450	1375 aa		4.08	□□□□□ -1.76
HOS3	YPL116W	TUB2	P02557	457 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	HXK2	P04807	486 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	POL3	P15436	1097 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PDC5	P16467	563 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	CDC23	P16522	626 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	CBF1	P17106	351 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	EMC1	P25574	760 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	ADY2	P25613	283 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	COQ8	P27697	501 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	THI4	P32318	326 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	LAS1	P36146	502 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	KTR4	P38131	464 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	RFS1	P38234	210 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	QNS1	P38795	714 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	TIF11	P38912	153 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	TAT2	P38967	592 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	YER010C	P40011	234 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PAC11	P40960	533 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	RRN7	P40992	514 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PSA1	P41940	361 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	TRS85	P46944	698 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	YJL181W	P46987	611 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	YJR079W	P47126	109 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	PSP2	P50109	593 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	YAP1802	P53309	568 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	RPT4	P53549	437 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	UFD2	P54860	961 aa		4.07	□□□□□ -1.76
HOS3	YPL116W	SKI8	Q02793	397 aa	Predicted RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	VBA4	Q04602	768 aa	Known RBP	4.07	□□□□□ -1.76
HOS3	YPL116W	PIB1	Q06651	286 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms