RNA–Protein interactions for RNA: YPL056C

LCL1, Transcript of Putative protein of unknown function, yeast

Gene LCL1, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCL1	YPL056C	YSP3	P25036	478 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CNB1	P25296	175 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	PGS1	P25578	521 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	IRE1	P32361	1115 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SPT14	P32363	452 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	GLC3	P32775	704 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	TFB1	P32776	642 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	MRT4	P33201	236 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	EDS1	P38073	919 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	ARA1	P38115	344 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	KTR3	P38130	404 aa	Predicted RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	YBR285W	P38354	144 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SOH1	P38633	127 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	RIM4	P38741	713 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	APE4	P38821	490 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	UTP9	P38882	575 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	YHR219W	P38900	624 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CEM1	P39525	442 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	YAT2	P40017	923 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	PFK26	P40433	827 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	UTP25	P40498	721 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	GTT1	P40582	234 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	COS4	P43542	379 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	VTC4	P47075	721 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	YJR098C	P47139	656 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	COS5	P47187	383 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SAP4	P53036	818 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	COG1	P53079	417 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	NUT1	P53114	1132 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	RIM8	P53179	542 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	FMP48	P53233	369 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	TWF1	P53250	332 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	DAM1	P53267	343 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SLI1	P53304	468 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SNF12	P53628	566 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CPR6	P53691	371 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	COS1	P53822	381 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	YNL193W	P53870	558 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	ALO1	P54783	526 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	MRPL13	Q02204	264 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	KAP120	Q02932	1032 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	YDR541C	Q03049	344 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	DIG1	Q03063	452 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	NHP10	Q03435	203 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	VHS1	Q03785	461 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	YMR027W	Q04371	470 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	SPO77	Q06134	477 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CDA1	Q06702	301 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	WHI4	Q07655	649 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	NTG2	Q08214	380 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	FEX1	Q08913	375 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	TYW1	Q08960	810 aa	Known RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	AKR2	Q12013	749 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	CWC2	Q12046	339 aa	Predicted RBP	2.66	□□□□□ -1.98
LCL1	YPL056C	YDR061W	Q12298	539 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	HMS1	Q12398	434 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	ZRT2	Q12436	422 aa		2.66	□□□□□ -1.98
LCL1	YPL056C	GLT1	Q12680	2145 aa	Known RBP	2.65	□□□□□ -1.98
LCL1	YPL056C	ATP2	P00830	511 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	ARG3	P05150	338 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
LCL1	YPL056C	RAD10	P06838	210 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	TOP3	P13099	656 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	NSP1	P14907	823 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	APA1	P16550	321 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	SGV1	P23293	657 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	DBP2	P24783	546 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	RRT12	P25381	491 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	ATG22	P25568	528 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	YCR101C	P25607	182 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	AAD3	P25612	363 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	PTC6	P25646	442 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	RPS7A	P26786	190 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	CAM1	P29547	415 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	SEC1	P30619	724 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	PET127	P32606	800 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	VAM7	P32912	316 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	TRM2	P33753	639 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	SIP2	P34164	415 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	RPC25	P35718	212 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	JEN1	P36035	616 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	CUE2	P36075	443 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	CAF4	P36130	643 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	GLY1	P37303	387 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	GRX7	P38068	203 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	PDX3	P38075	228 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	CHK1	P38147	527 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	DUG2	P38149	878 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
LCL1	YPL056C	YBR238C	P38330	731 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	YMR262W	P38430	313 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	PRS2	P38620	318 aa	Known RBP	2.65	□□□□□ -1.99
LCL1	YPL056C	MMS21	P38632	267 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	SMF2	P38778	549 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	TRM5	P38793	499 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	YHR202W	P38887	602 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.65	□□□□□ -1.99	not detected
LCL1	YPL056C	YDR089W	P38966	869 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	EXO1	P39875	702 aa		2.65	□□□□□ -1.99
LCL1	YPL056C	THO1	P40040	218 aa	Known RBP	2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms