RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C SPS19P32573 292 aaKnown RBP8.02□□□□□ -1.13
LSP1YPL004C YME1P32795 747 aa8.02□□□□□ -1.13
LSP1YPL004C NFU1P32860 256 aa8.02□□□□□ -1.13
LSP1YPL004C YBR259WP38338 688 aa8.02□□□□□ -1.13
LSP1YPL004C PFS1P38872 237 aa8.02□□□□□ -1.13
LSP1YPL004C ALA1P40825 983 aaKnown RBP8.02□□□□□ -1.13
LSP1YPL004C MIC19P43594 170 aa8.02□□□□□ -1.13
LSP1YPL004C YJR039WP47107 1121 aa8.02□□□□□ -1.13
LSP1YPL004C PEX8P53248 589 aa8.02□□□□□ -1.13
LSP1YPL004C SLT2Q00772 484 aa8.02□□□□□ -1.13
LSP1YPL004C YPL113CQ02961 396 aa8.02□□□□□ -1.13
LSP1YPL004C YDR109CQ04585 715 aa8.02□□□□□ -1.13
LSP1YPL004C ATG10Q07879 167 aa8.02□□□□□ -1.13
LSP1YPL004C TGL5Q12043 749 aa8.02□□□□□ -1.13
LSP1YPL004C NAG1Q8TGN9 163 aa8.02□□□□□ -1.13
LSP1YPL004C SUC2P00724 532 aa8.01□□□□□ -1.13
LSP1YPL004C INH1P01097 85 aa8.01□□□□□ -1.13
LSP1YPL004C YKR104WP0CE69 306 aa8.01□□□□□ -1.13
LSP1YPL004C GPA2P10823 449 aa8.01□□□□□ -1.13
LSP1YPL004C ATP12P22135 325 aa8.01□□□□□ -1.13
LSP1YPL004C AMS1P22855 1083 aa8.01□□□□□ -1.13
LSP1YPL004C KAR4P25583 335 aa8.01□□□□□ -1.13
LSP1YPL004C TFB1P32776 642 aa8.01□□□□□ -1.13
LSP1YPL004C MAK5P38112 773 aaPredicted RBP8.01□□□□□ -1.13
LSP1YPL004C LDB7P38210 180 aa8.01□□□□□ -1.13
LSP1YPL004C TAE1P38340 232 aa8.01□□□□□ -1.13
LSP1YPL004C SRP72P38688 640 aaKnown RBP8.01□□□□□ -1.13
LSP1YPL004C MEF2P39677 819 aa8.01□□□□□ -1.13
LSP1YPL004C ALG8P40351 577 aa8.01□□□□□ -1.13
LSP1YPL004C CCT8P47079 568 aaKnown RBP8.01□□□□□ -1.13
LSP1YPL004C PRP31P49704 494 aaPredicted RBP8.01□□□□□ -1.13
LSP1YPL004C SWC4P53201 476 aa8.01□□□□□ -1.13
LSP1YPL004C TGL2P54857 326 aa8.01□□□□□ -1.13
LSP1YPL004C PET117Q02771 107 aa8.01□□□□□ -1.13
LSP1YPL004C SHR3Q02774 210 aa8.01□□□□□ -1.13
LSP1YPL004C CIA1Q05583 330 aa8.01□□□□□ -1.13
LSP1YPL004C PNP1Q05788 311 aa8.01□□□□□ -1.13
LSP1YPL004C NUT2Q06213 157 aa8.01□□□□□ -1.13
LSP1YPL004C YEL077CQ3E7X8 1277 aa8.01□□□□□ -1.13
LSP1YPL004C COX3P00420 269 aa8□□□□□ -1.13
LSP1YPL004C HSP26P15992 214 aaKnown RBP RIP-Chip data8□□□□□ -1.13not detected
LSP1YPL004C PHO84P25297 587 aaKnown RBP8□□□□□ -1.13
LSP1YPL004C CIN8P27895 1000 aa8□□□□□ -1.13
LSP1YPL004C GDA1P32621 518 aa8□□□□□ -1.13
LSP1YPL004C BEM3P32873 1128 aa8□□□□□ -1.13
LSP1YPL004C IML3P38265 245 aa8□□□□□ -1.13
LSP1YPL004C TIM17P39515 158 aa8□□□□□ -1.13
LSP1YPL004C ACO2P39533 789 aa8□□□□□ -1.13
LSP1YPL004C TIF34P40217 347 aaKnown RBP8□□□□□ -1.13
LSP1YPL004C YJL070CP40361 888 aa8□□□□□ -1.13
LSP1YPL004C GTS1P40956 396 aa8□□□□□ -1.13
LSP1YPL004C DAN4P47179 1161 aa8□□□□□ -1.13
LSP1YPL004C ARH1P48360 493 aa8□□□□□ -1.13
LSP1YPL004C NBP35P52920 328 aa8□□□□□ -1.13
LSP1YPL004C FRE4P53746 719 aa8□□□□□ -1.13
LSP1YPL004C CDC123Q05791 360 aa8□□□□□ -1.13
LSP1YPL004C HRK1Q08732 759 aaKnown RBP8□□□□□ -1.13
LSP1YPL004C BUD7Q08754 746 aa8□□□□□ -1.13
LSP1YPL004C SRO7Q12038 1033 aa8□□□□□ -1.13
LSP1YPL004C RAD1P06777 1100 aa7.99□□□□□ -1.13
LSP1YPL004C ERG20P08524 352 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C SPT15P13393 240 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C AMD1P15274 810 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C POL30P15873 258 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C EPT1P22140 391 aa7.99□□□□□ -1.13
LSP1YPL004C MRPL25P23369 157 aa7.99□□□□□ -1.13
LSP1YPL004C RFA2P26754 273 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C MRPL9P31334 269 aa7.99□□□□□ -1.13
LSP1YPL004C TOM20P35180 183 aa7.99□□□□□ -1.13
LSP1YPL004C STB6P36085 766 aa7.99□□□□□ -1.13
LSP1YPL004C YSW1P38280 609 aa7.99□□□□□ -1.13
LSP1YPL004C DBP8P38719 431 aa7.99□□□□□ -1.13
LSP1YPL004C YHI9P38765 294 aa7.99□□□□□ -1.13
LSP1YPL004C CCT6P39079 546 aa7.99□□□□□ -1.13
LSP1YPL004C MNN1P39106 762 aa7.99□□□□□ -1.13
LSP1YPL004C SMX2P40204 77 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C IME4P41833 600 aa7.99□□□□□ -1.13
LSP1YPL004C SNO2P53823 222 aa7.99□□□□□ -1.13
LSP1YPL004C RPN9Q04062 393 aaKnown RBP7.99□□□□□ -1.13
LSP1YPL004C RSC2Q06488 889 aa7.99□□□□□ -1.13
LSP1YPL004C FRA1Q07825 749 aa7.99□□□□□ -1.13
LSP1YPL004C SMF3Q12078 473 aaPredicted RBP7.99□□□□□ -1.13
LSP1YPL004C TEL1P38110 2787 aa7.98□□□□□ -1.13
LSP1YPL004C RPB2P08518 1224 aaKnown RBP7.98□□□□□ -1.13
LSP1YPL004C VAN1P23642 535 aa7.98□□□□□ -1.13
LSP1YPL004C SNT1P25357 1226 aa7.98□□□□□ -1.13
LSP1YPL004C BEM1P29366 551 aa7.98□□□□□ -1.13
LSP1YPL004C MNN10P50108 393 aaKnown RBP7.98□□□□□ -1.13
LSP1YPL004C YGL108CP53139 140 aa7.98□□□□□ -1.13
LSP1YPL004C BLS1Q06071 122 aa7.98□□□□□ -1.13
LSP1YPL004C SYT1Q06836 1226 aa7.98□□□□□ -1.13
LSP1YPL004C CPA1P07258 411 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C GLN4P13188 809 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C NSP1P14907 823 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C YCR099CP25657 155 aa7.97□□□□□ -1.13
LSP1YPL004C RIM1P32445 135 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C PRP18P33411 251 aaPredicted RBP7.97□□□□□ -1.13
LSP1YPL004C ETR1P38071 380 aa7.97□□□□□ -1.13
LSP1YPL004C RRP3P38712 501 aaKnown RBP7.97□□□□□ -1.13
LSP1YPL004C PCL5P38794 229 aa7.97□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms