RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W SEC18P18759 758 aaKnown RBP3.75□□□□□ -1.81
VPS17YOR132W SAN1P22470 610 aa3.75□□□□□ -1.81
VPS17YOR132W YCR061WP25639 631 aa3.75□□□□□ -1.81
VPS17YOR132W PES4P39684 611 aa3.75□□□□□ -1.81
VPS17YOR132W YMR018WQ04364 514 aa3.75□□□□□ -1.81
VPS17YOR132W HRD3Q05787 833 aa3.75□□□□□ -1.81
VPS17YOR132W SPN1Q06505 410 aaPredicted RBP3.75□□□□□ -1.81
VPS17YOR132W BSP1Q06604 576 aa3.75□□□□□ -1.81
VPS17YOR132W YOL114CQ12322 202 aa3.75□□□□□ -1.81
VPS17YOR132W SIR4P11978 1358 aa3.75□□□□□ -1.81
VPS17YOR132W CLC1P17891 233 aa3.75□□□□□ -1.81
VPS17YOR132W RPS7AP26786 190 aaKnown RBP3.75□□□□□ -1.81
VPS17YOR132W VMA8P32610 256 aaKnown RBP3.75□□□□□ -1.81
VPS17YOR132W PSY4P38193 441 aa3.75□□□□□ -1.81
VPS17YOR132W SAE2P46946 345 aa3.75□□□□□ -1.81
VPS17YOR132W NMD5P46970 1048 aa3.75□□□□□ -1.81
VPS17YOR132W NET1P47035 1189 aa3.75□□□□□ -1.81
VPS17YOR132W SGM1P47166 707 aa3.75□□□□□ -1.81
VPS17YOR132W BPL1P48445 690 aaPredicted RBP3.75□□□□□ -1.81
VPS17YOR132W MOT3P54785 490 aaKnown RBP3.75□□□□□ -1.81
VPS17YOR132W UBP16Q02863 499 aa3.75□□□□□ -1.81
VPS17YOR132W EIS1Q05050 843 aaKnown RBP3.75□□□□□ -1.81
VPS17YOR132W YER175W-AQ8TGU4 54 aa3.75□□□□□ -1.81
VPS17YOR132W USO1P25386 1790 aa3.74□□□□□ -1.81
VPS17YOR132W RPS24AP0CX31 135 aaKnown RBP3.74□□□□□ -1.81
VPS17YOR132W RPS24BP0CX32 135 aaKnown RBP3.74□□□□□ -1.81
VPS17YOR132W AMD2P22580 549 aa3.74□□□□□ -1.81
VPS17YOR132W YKL050CP35736 922 aa3.74□□□□□ -1.81
VPS17YOR132W ULP2P40537 1034 aaPredicted RBP3.74□□□□□ -1.81
VPS17YOR132W CIR1P42940 261 aa3.74□□□□□ -1.81
VPS17YOR132W BST1P43571 1029 aa3.74□□□□□ -1.81
VPS17YOR132W YML119WQ03208 357 aa3.74□□□□□ -1.81
VPS17YOR132W CRF1Q04930 467 aa3.74□□□□□ -1.81
VPS17YOR132W IMH1Q06704 911 aaKnown RBP3.74□□□□□ -1.81
VPS17YOR132W CYK3Q07533 885 aa3.74□□□□□ -1.81
VPS17YOR132W YRF1-4O13559 1382 aa3.73□□□□□ -1.81
VPS17YOR132W HSP82P02829 709 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W KGD2P19262 463 aaPredicted RBP3.73□□□□□ -1.81
VPS17YOR132W URE2P23202 354 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W RER1P25560 188 aa3.73□□□□□ -1.81
VPS17YOR132W VPH1P32563 840 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W ANP1P32629 500 aa3.73□□□□□ -1.81
VPS17YOR132W MUD2P36084 527 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W NOP4P37838 685 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W ARB1P40024 610 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W SNO3P43544 222 aa3.73□□□□□ -1.81
VPS17YOR132W UPF3P48412 387 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W YGR016WP53209 190 aa3.73□□□□□ -1.81
VPS17YOR132W TEP1P53916 434 aa3.73□□□□□ -1.81
VPS17YOR132W AAT1Q01802 451 aa3.73□□□□□ -1.81
VPS17YOR132W MAK10Q02197 733 aa3.73□□□□□ -1.81
VPS17YOR132W ERO1Q03103 563 aa3.73□□□□□ -1.81
VPS17YOR132W BLS1Q06071 122 aa3.73□□□□□ -1.81
VPS17YOR132W AIM6Q07716 390 aa3.73□□□□□ -1.81
VPS17YOR132W YDL242WQ07746 117 aa3.73□□□□□ -1.81
VPS17YOR132W LCB4Q12246 624 aa3.73□□□□□ -1.81
VPS17YOR132W FRE7Q12333 620 aa3.73□□□□□ -1.81
VPS17YOR132W RPO41P13433 1351 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W ADE6P38972 1358 aaKnown RBP3.73□□□□□ -1.81
VPS17YOR132W CYB2P00175 591 aa3.72□□□□□ -1.81
VPS17YOR132W PCT1P13259 424 aa3.72□□□□□ -1.81
VPS17YOR132W PEX5P35056 612 aa3.72□□□□□ -1.81
VPS17YOR132W ARO9P38840 513 aaPredicted RBP3.72□□□□□ -1.81
VPS17YOR132W PSA1P41940 361 aaKnown RBP3.72□□□□□ -1.81
VPS17YOR132W BUD27P43573 796 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
VPS17YOR132W MAD3P47074 515 aa3.72□□□□□ -1.81
VPS17YOR132W DSD1P53095 428 aa3.72□□□□□ -1.81
VPS17YOR132W RCF1Q03713 159 aa3.72□□□□□ -1.81
VPS17YOR132W ARA2Q04212 335 aa3.72□□□□□ -1.81
VPS17YOR132W PLM2Q04383 521 aa3.72□□□□□ -1.81
VPS17YOR132W PNO1Q99216 274 aaKnown RBP3.72□□□□□ -1.81
VPS17YOR132W MRP7P12687 371 aa3.71□□□□□ -1.81
VPS17YOR132W NAT1P12945 854 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W SPO16P17122 198 aa3.71□□□□□ -1.81
VPS17YOR132W AAC3P18238 307 aa3.71□□□□□ -1.81
VPS17YOR132W STT3P39007 718 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W SAP1P39955 897 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W DJP1P40564 432 aa3.71□□□□□ -1.81
VPS17YOR132W SNM1P40993 198 aa3.71□□□□□ -1.81
VPS17YOR132W GPD2P41911 440 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W GLO1P50107 326 aa3.71□□□□□ -1.81
VPS17YOR132W EAF7P53911 425 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W ERG13P54839 491 aaKnown RBP3.71□□□□□ -1.81
VPS17YOR132W YPL071CQ02864 156 aa3.71□□□□□ -1.81
VPS17YOR132W TPO3Q06451 622 aa3.71□□□□□ -1.81
VPS17YOR132W YLR111WQ12528 110 aa3.71□□□□□ -1.81
VPS17YOR132W YIL177CP40434 1758 aa3.71□□□□□ -1.82
VPS17YOR132W YJL225CP40889 1758 aa3.71□□□□□ -1.82
VPS17YOR132W TPM1P17536 199 aaKnown RBP3.71□□□□□ -1.82
VPS17YOR132W ROX1P25042 368 aa3.71□□□□□ -1.82
VPS17YOR132W RRP43P25359 394 aaPredicted RBP3.71□□□□□ -1.82
VPS17YOR132W MSH1P25846 959 aa3.71□□□□□ -1.82
VPS17YOR132W SWC3P31376 625 aa3.71□□□□□ -1.82
VPS17YOR132W PAH1P32567 862 aa3.71□□□□□ -1.82
VPS17YOR132W KES1P35844 434 aaKnown RBP3.71□□□□□ -1.82
VPS17YOR132W MEP1P40260 492 aa3.71□□□□□ -1.82
VPS17YOR132W IDP3P53982 420 aaKnown RBP3.71□□□□□ -1.82
VPS17YOR132W TDA9Q04545 1251 aa3.71□□□□□ -1.82
VPS17YOR132W YML053CQ04978 212 aa3.71□□□□□ -1.82
VPS17YOR132W SCM3Q12334 223 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms