RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W NOG1Q02892 647 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W ENT5Q03769 411 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W YSH1Q06224 779 aaPredicted RBP6.23□□□□□ -1.41
CAF40YNL288W NDD1Q08887 554 aa6.23□□□□□ -1.41
CAF40YNL288W APL5Q08951 932 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W RMP1Q12530 201 aa6.23□□□□□ -1.41
CAF40YNL288W CET1O13297 549 aaPredicted RBP6.22□□□□□ -1.41
CAF40YNL288W CYC7P00045 113 aa6.22□□□□□ -1.41
CAF40YNL288W PUF4P25339 888 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
CAF40YNL288W KAR9P32526 644 aa6.22□□□□□ -1.41
CAF40YNL288W OLA1P38219 394 aaKnown RBP6.22□□□□□ -1.41
CAF40YNL288W ARP1P38696 384 aa6.22□□□□□ -1.41
CAF40YNL288W YHL041WP38730 149 aa6.22□□□□□ -1.41
CAF40YNL288W PPE1P38796 400 aa6.22□□□□□ -1.41
CAF40YNL288W DUN1P39009 513 aa6.22□□□□□ -1.41
CAF40YNL288W ATM1P40416 690 aa6.22□□□□□ -1.41
CAF40YNL288W CEP3P40969 608 aa6.22□□□□□ -1.41
CAF40YNL288W ROK1P45818 564 aaPredicted RBP6.22□□□□□ -1.41
CAF40YNL288W IML2P47031 731 aa6.22□□□□□ -1.41
CAF40YNL288W FLC3P53121 802 aa6.22□□□□□ -1.41
CAF40YNL288W PCL10P53124 433 aa6.22□□□□□ -1.41
CAF40YNL288W YGR127WP53275 312 aa6.22□□□□□ -1.41
CAF40YNL288W YNR063WP53749 607 aa6.22□□□□□ -1.41
CAF40YNL288W HOS3Q02959 697 aaKnown RBP6.22□□□□□ -1.41
CAF40YNL288W RPN4Q03465 531 aa6.22□□□□□ -1.41
CAF40YNL288W ATG23Q06671 453 aa6.22□□□□□ -1.41
CAF40YNL288W NRT1Q08485 598 aa6.22□□□□□ -1.41
CAF40YNL288W AVL9Q12500 764 aa6.22□□□□□ -1.41
CAF40YNL288W AFI1Q99222 893 aa6.22□□□□□ -1.41
CAF40YNL288W CDC8P00572 216 aa6.21□□□□□ -1.42
CAF40YNL288W YML002WP0CF17 737 aa6.21□□□□□ -1.42
CAF40YNL288W SPO16P17122 198 aa6.21□□□□□ -1.42
CAF40YNL288W ARF2P19146 181 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W FPR1P20081 114 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W DAL81P21657 970 aa6.21□□□□□ -1.42
CAF40YNL288W MIH1P23748 554 aa6.21□□□□□ -1.42
CAF40YNL288W AIM26P32858 118 aa6.21□□□□□ -1.42
CAF40YNL288W MRS6P32864 603 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W APM3P38153 483 aa6.21□□□□□ -1.42
CAF40YNL288W VHC1P38329 1120 aa6.21□□□□□ -1.42
CAF40YNL288W CRP1P38845 465 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W MKT1P40850 830 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W SLS1P42900 643 aa6.21□□□□□ -1.42
CAF40YNL288W RMD8P43620 662 aa6.21□□□□□ -1.42
CAF40YNL288W NMD5P46970 1048 aa6.21□□□□□ -1.42
CAF40YNL288W ALY2P47029 1046 aa6.21□□□□□ -1.42
CAF40YNL288W PYK2P52489 506 aaKnown RBP6.21□□□□□ -1.42
CAF40YNL288W YGR045CP53229 120 aa6.21□□□□□ -1.42
CAF40YNL288W YPR003CP53394 754 aa6.21□□□□□ -1.42
CAF40YNL288W YTP1P53584 459 aa6.21□□□□□ -1.42
CAF40YNL288W ELA1P53861 379 aaPredicted RBP6.21□□□□□ -1.42
CAF40YNL288W SWC7Q06707 132 aa6.21□□□□□ -1.42
CAF40YNL288W NUR1Q12066 484 aa6.21□□□□□ -1.42
CAF40YNL288W HOS1Q12214 470 aa6.21□□□□□ -1.42
CAF40YNL288W AI5_ALPHAQ9ZZX1 630 aa6.21□□□□□ -1.42
CAF40YNL288W IMA3P0CW40 589 aa6.2□□□□□ -1.42
CAF40YNL288W IMA4P0CW41 589 aa6.2□□□□□ -1.42
CAF40YNL288W LIP5P32875 414 aa6.2□□□□□ -1.42
CAF40YNL288W CSE1P33307 960 aa6.2□□□□□ -1.42
CAF40YNL288W STE13P33894 931 aa6.2□□□□□ -1.42
CAF40YNL288W YAT2P40017 923 aa6.2□□□□□ -1.42
CAF40YNL288W SCC4P40090 624 aa6.2□□□□□ -1.42
CAF40YNL288W OSW5P40219 148 aa6.2□□□□□ -1.42
CAF40YNL288W IST3P40565 148 aaPredicted RBP6.2□□□□□ -1.42
CAF40YNL288W NUP84P52891 726 aa6.2□□□□□ -1.42
CAF40YNL288W RTA1P53047 317 aa6.2□□□□□ -1.42
CAF40YNL288W YNR061CP53747 219 aa6.2□□□□□ -1.42
CAF40YNL288W MET14Q02196 202 aa6.2□□□□□ -1.42
CAF40YNL288W NOP6Q07623 225 aaKnown RBP6.2□□□□□ -1.42
CAF40YNL288W IMA2Q08295 589 aa6.2□□□□□ -1.42
CAF40YNL288W PGC1Q08959 321 aa6.2□□□□□ -1.42
CAF40YNL288W YLR046CQ12253 270 aa6.2□□□□□ -1.42
CAF40YNL288W NSI1Q12457 570 aa6.2□□□□□ -1.42
CAF40YNL288W GCR1P07261 785 aa6.19□□□□□ -1.42
CAF40YNL288W RPS4AP0CX35 261 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W RPS4BP0CX36 261 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W CDC24P11433 854 aaPredicted RBP6.19□□□□□ -1.42
CAF40YNL288W PRP9P19736 530 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W RPO26P20435 155 aa6.19□□□□□ -1.42
CAF40YNL288W MRPL8P22353 238 aa6.19□□□□□ -1.42
CAF40YNL288W AAT2P23542 418 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W GEX1P25596 615 aa6.19□□□□□ -1.42
CAF40YNL288W HEM12P32347 362 aaPredicted RBP6.19□□□□□ -1.42
CAF40YNL288W PLC1P32383 869 aa6.19□□□□□ -1.42
CAF40YNL288W STE5P32917 917 aa6.19□□□□□ -1.42
CAF40YNL288W PXA2P34230 853 aa6.19□□□□□ -1.42
CAF40YNL288W RPC37P36121 282 aa6.19□□□□□ -1.42
CAF40YNL288W GEX2P36173 615 aa6.19□□□□□ -1.42
CAF40YNL288W PBP2P38151 413 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
CAF40YNL288W ATG14P38270 344 aa6.19□□□□□ -1.42
CAF40YNL288W MGE1P38523 228 aa6.19□□□□□ -1.42
CAF40YNL288W ELO3P40319 345 aa6.19□□□□□ -1.42
CAF40YNL288W AIM23P47015 356 aa6.19□□□□□ -1.42
CAF40YNL288W TRF5P48561 642 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W ASN2P49090 572 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W RRB1Q04225 511 aaKnown RBP6.19□□□□□ -1.42
CAF40YNL288W LDB18Q07887 179 aa6.19□□□□□ -1.42
CAF40YNL288W PEX15Q08215 383 aa6.19□□□□□ -1.42
CAF40YNL288W OCA6Q12454 224 aa6.19□□□□□ -1.42
CAF40YNL288W PEX11Q12462 236 aa6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms