RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W VPS27P40343 622 aaKnown RBP4.32□□□□□ -1.72
CSM3YMR048W IMA5P40884 581 aa4.32□□□□□ -1.72
CSM3YMR048W NPA3P47122 385 aa4.32□□□□□ -1.72
CSM3YMR048W YLR281CQ05863 155 aa4.32□□□□□ -1.72
CSM3YMR048W HIM1Q06674 414 aa4.32□□□□□ -1.72
CSM3YMR048W ARP7Q12406 477 aa4.32□□□□□ -1.72
CSM3YMR048W SPO14P36126 1683 aa4.32□□□□□ -1.72
CSM3YMR048W HES1P35843 434 aa4.31□□□□□ -1.72
CSM3YMR048W FUN12P39730 1002 aaKnown RBP4.31□□□□□ -1.72
CSM3YMR048W YIL169CP40442 995 aa4.31□□□□□ -1.72
CSM3YMR048W CDC1P40986 491 aa4.31□□□□□ -1.72
CSM3YMR048W TEP1P53916 434 aa4.31□□□□□ -1.72
CSM3YMR048W CEG1Q01159 459 aaPredicted RBP4.31□□□□□ -1.72
CSM3YMR048W DOP1Q03921 1698 aa4.3□□□□□ -1.72
CSM3YMR048W PHO81P17442 1178 aa4.3□□□□□ -1.72
CSM3YMR048W MSH1P25846 959 aa4.3□□□□□ -1.72
CSM3YMR048W VPS25P47142 202 aa4.3□□□□□ -1.72
CSM3YMR048W UBP8P50102 471 aa4.3□□□□□ -1.72
CSM3YMR048W YPR003CP53394 754 aa4.3□□□□□ -1.72
CSM3YMR048W EAF7P53911 425 aaKnown RBP4.3□□□□□ -1.72
CSM3YMR048W PIG1Q06216 648 aa4.3□□□□□ -1.72
CSM3YMR048W NRT1Q08485 598 aa4.3□□□□□ -1.72
CSM3YMR048W BUD21Q08492 214 aaPredicted RBP4.3□□□□□ -1.72
CSM3YMR048W RRP6Q12149 733 aaKnown RBP4.3□□□□□ -1.72
CSM3YMR048W RKM3P38222 552 aa4.29□□□□□ -1.72
CSM3YMR048W VPS41P38959 992 aa4.29□□□□□ -1.72
CSM3YMR048W PCL6P40038 420 aa4.29□□□□□ -1.72
CSM3YMR048W QRI7P43122 407 aa4.29□□□□□ -1.72
CSM3YMR048W PAP2P53632 584 aaKnown RBP4.29□□□□□ -1.72
CSM3YMR048W YPL108WQ02872 168 aaPredicted RBP4.29□□□□□ -1.72
CSM3YMR048W TY3B-GQ99315 1547 aa4.28□□□□□ -1.72
CSM3YMR048W COX1P00401 534 aa4.28□□□□□ -1.72
CSM3YMR048W APM3P38153 483 aa4.28□□□□□ -1.72
CSM3YMR048W UBX6P47049 396 aa4.28□□□□□ -1.72
CSM3YMR048W MAD3P47074 515 aa4.28□□□□□ -1.72
CSM3YMR048W UBX4P54730 416 aa4.28□□□□□ -1.72
CSM3YMR048W CAC2Q04199 468 aa4.28□□□□□ -1.72
CSM3YMR048W VMS1Q04311 632 aaKnown RBP4.28□□□□□ -1.72
CSM3YMR048W MCH4Q08268 501 aa4.28□□□□□ -1.72
CSM3YMR048W YSP2Q06681 1438 aa4.28□□□□□ -1.72
CSM3YMR048W ARO1P08566 1588 aaKnown RBP4.27□□□□□ -1.73
CSM3YMR048W YBT1P32386 1661 aa4.27□□□□□ -1.73
CSM3YMR048W PHO2P07269 559 aa4.27□□□□□ -1.73
CSM3YMR048W YHL041WP38730 149 aa4.27□□□□□ -1.73
CSM3YMR048W PHM8P40025 321 aa4.27□□□□□ -1.73
CSM3YMR048W SAD1P43589 448 aa4.27□□□□□ -1.73
CSM3YMR048W YGL260WP53056 76 aa4.27□□□□□ -1.73
CSM3YMR048W BET4Q00618 327 aa4.27□□□□□ -1.73
CSM3YMR048W SWF1Q04629 336 aa4.27□□□□□ -1.73
CSM3YMR048W GTB1Q04924 702 aa4.27□□□□□ -1.73
CSM3YMR048W YTH1Q06102 208 aaPredicted RBP4.27□□□□□ -1.73
CSM3YMR048W RVB2Q12464 471 aaKnown RBP4.27□□□□□ -1.73
CSM3YMR048W RPL42AP0CX27 106 aaKnown RBP4.26□□□□□ -1.73
CSM3YMR048W RPL42BP0CX28 106 aaKnown RBP4.26□□□□□ -1.73
CSM3YMR048W PGI1P12709 554 aaKnown RBP4.26□□□□□ -1.73
CSM3YMR048W FRD1P32614 470 aaKnown RBP4.26□□□□□ -1.73
CSM3YMR048W PTH2P34222 208 aa4.26□□□□□ -1.73
CSM3YMR048W VRG4P40107 337 aa4.26□□□□□ -1.73
CSM3YMR048W FAF1P40546 346 aaPredicted RBP4.26□□□□□ -1.73
CSM3YMR048W YGR079WP53249 370 aa4.26□□□□□ -1.73
CSM3YMR048W ECI1Q05871 280 aa4.26□□□□□ -1.73
CSM3YMR048W GPN2Q08726 347 aaPredicted RBP4.26□□□□□ -1.73
CSM3YMR048W ICL2Q12031 575 aa4.26□□□□□ -1.73
CSM3YMR048W HAP1P0CE41 1502 aa4.26□□□□□ -1.73
CSM3YMR048W PIF1P07271 859 aa4.25□□□□□ -1.73
CSM3YMR048W MSS18P08593 268 aa4.25□□□□□ -1.73
CSM3YMR048W GIS2P53849 153 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
CSM3YMR048W MOT3P54785 490 aaKnown RBP4.25□□□□□ -1.73
CSM3YMR048W YDR109CQ04585 715 aa4.25□□□□□ -1.73
CSM3YMR048W POS5Q06892 414 aa4.25□□□□□ -1.73
CSM3YMR048W BNI1P41832 1953 aa4.24□□□□□ -1.73
CSM3YMR048W POL3P15436 1097 aa4.24□□□□□ -1.73
CSM3YMR048W MRS6P32864 603 aaKnown RBP4.24□□□□□ -1.73
CSM3YMR048W MNN2P38069 597 aa4.24□□□□□ -1.73
CSM3YMR048W CAB2P40506 365 aa4.24□□□□□ -1.73
CSM3YMR048W DIG1Q03063 452 aaKnown RBP4.24□□□□□ -1.73
CSM3YMR048W ECM16Q04217 1267 aaKnown RBP4.24□□□□□ -1.73
CSM3YMR048W YMR317WQ04893 1140 aa4.24□□□□□ -1.73
CSM3YMR048W BAG7Q12128 409 aa4.24□□□□□ -1.73
CSM3YMR048W CHC1P22137 1653 aaKnown RBP4.23□□□□□ -1.73
CSM3YMR048W MIS1P09440 975 aaKnown RBP4.23□□□□□ -1.73
CSM3YMR048W MRP2P10663 115 aaPredicted RBP4.23□□□□□ -1.73
CSM3YMR048W SIR1P21691 654 aa4.23□□□□□ -1.73
CSM3YMR048W PPZ1P26570 692 aa4.23□□□□□ -1.73
CSM3YMR048W YAP3P38749 330 aa4.23□□□□□ -1.73
CSM3YMR048W STT3P39007 718 aaKnown RBP4.23□□□□□ -1.73
CSM3YMR048W MSY1P48527 492 aa4.23□□□□□ -1.73
CSM3YMR048W YGL036WP53185 909 aaPredicted RBP4.23□□□□□ -1.73
CSM3YMR048W ATG21Q02887 496 aa4.23□□□□□ -1.73
CSM3YMR048W ATG16Q03818 150 aa4.23□□□□□ -1.73
CSM3YMR048W SCW10Q04951 389 aa4.23□□□□□ -1.73
CSM3YMR048W FMP42Q04991 504 aa4.23□□□□□ -1.73
CSM3YMR048W BRE1Q07457 700 aaKnown RBP4.23□□□□□ -1.73
CSM3YMR048W YLR112WQ12130 139 aa4.23□□□□□ -1.73
CSM3YMR048W DNF2Q12675 1612 aa4.23□□□□□ -1.73
CSM3YMR048W MCM3P24279 971 aaKnown RBP4.22□□□□□ -1.73
CSM3YMR048W YCR006CP25350 157 aa4.22□□□□□ -1.73
CSM3YMR048W URK1P27515 501 aa4.22□□□□□ -1.73
CSM3YMR048W ACA1P39970 489 aa4.22□□□□□ -1.73
CSM3YMR048W YND1P40009 630 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms