RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C AAD4Q07747 329 aa2.94□□□□□ -1.94
CMS1YLR003C FRE3Q08905 711 aa2.94□□□□□ -1.94
CMS1YLR003C PPT2Q12036 173 aa2.94□□□□□ -1.94
CMS1YLR003C YER145C-AA0A023PYF4 145 aa2.93□□□□□ -1.94
CMS1YLR003C PIF1P07271 859 aa2.93□□□□□ -1.94
CMS1YLR003C MSS18P08593 268 aa2.93□□□□□ -1.94
CMS1YLR003C BAR1P12630 587 aa2.93□□□□□ -1.94
CMS1YLR003C APA1P16550 321 aaKnown RBP2.93□□□□□ -1.94
CMS1YLR003C SWI4P25302 1093 aaKnown RBP2.93□□□□□ -1.94
CMS1YLR003C LAC1P28496 418 aa2.93□□□□□ -1.94
CMS1YLR003C HES1P35843 434 aa2.93□□□□□ -1.94
CMS1YLR003C STT3P39007 718 aaKnown RBP2.93□□□□□ -1.94
CMS1YLR003C CAB2P40506 365 aa2.93□□□□□ -1.94
CMS1YLR003C FAF1P40546 346 aaPredicted RBP2.93□□□□□ -1.94
CMS1YLR003C UBX4P54730 416 aa2.93□□□□□ -1.94
CMS1YLR003C ICL2Q12031 575 aa2.93□□□□□ -1.94
CMS1YLR003C RRP6Q12149 733 aaKnown RBP2.93□□□□□ -1.94
CMS1YLR003C ADE3P07245 946 aaKnown RBP2.92□□□□□ -1.94
CMS1YLR003C MIS1P09440 975 aaKnown RBP2.92□□□□□ -1.94
CMS1YLR003C PGI1P12709 554 aaKnown RBP2.92□□□□□ -1.94
CMS1YLR003C PDE1P22434 369 aa2.92□□□□□ -1.94
CMS1YLR003C PUS4P48567 403 aaKnown RBP2.92□□□□□ -1.94
CMS1YLR003C YNL181WP53878 407 aa2.92□□□□□ -1.94
CMS1YLR003C AIM6Q07716 390 aa2.92□□□□□ -1.94
CMS1YLR003C GPA1P08539 472 aa2.91□□□□□ -1.94
CMS1YLR003C YCR006CP25350 157 aa2.91□□□□□ -1.94
CMS1YLR003C MGR1P25573 417 aa2.91□□□□□ -1.94
CMS1YLR003C SWC3P31376 625 aa2.91□□□□□ -1.94
CMS1YLR003C GCD7P32502 381 aaPredicted RBP2.91□□□□□ -1.94
CMS1YLR003C MRS6P32864 603 aaKnown RBP2.91□□□□□ -1.94
CMS1YLR003C TRS65P32893 560 aa2.91□□□□□ -1.94
CMS1YLR003C RIM2P38127 377 aa2.91□□□□□ -1.94
CMS1YLR003C PAP2P53632 584 aaKnown RBP2.91□□□□□ -1.94
CMS1YLR003C YPL108WQ02872 168 aaPredicted RBP2.91□□□□□ -1.94
CMS1YLR003C ATG21Q02887 496 aa2.91□□□□□ -1.94
CMS1YLR003C BRE1Q07457 700 aaKnown RBP2.91□□□□□ -1.94
CMS1YLR003C IWR1Q07532 353 aaPredicted RBP2.91□□□□□ -1.94
CMS1YLR003C SIR1P21691 654 aa2.9□□□□□ -1.95
CMS1YLR003C MCM3P24279 971 aaKnown RBP2.9□□□□□ -1.95
CMS1YLR003C CLB4P24871 460 aa2.9□□□□□ -1.95
CMS1YLR003C SPC72P39723 622 aa2.9□□□□□ -1.95
CMS1YLR003C PSF2P40359 213 aa2.9□□□□□ -1.95
CMS1YLR003C YRB30P53107 440 aaPredicted RBP2.9□□□□□ -1.95
CMS1YLR003C TAM41P53230 385 aa2.9□□□□□ -1.95
CMS1YLR003C APJ1P53940 528 aa2.9□□□□□ -1.95
CMS1YLR003C VMS1Q04311 632 aaKnown RBP2.9□□□□□ -1.95
CMS1YLR003C BLS1Q06071 122 aa2.9□□□□□ -1.95
CMS1YLR003C YBR255C-AQ3E776 120 aa2.9□□□□□ -1.95
CMS1YLR003C NUC1P08466 329 aa2.89□□□□□ -1.95
CMS1YLR003C ARP2P32381 391 aaKnown RBP2.89□□□□□ -1.95
CMS1YLR003C PTH2P34222 208 aa2.89□□□□□ -1.95
CMS1YLR003C MRPL36P36531 177 aa2.89□□□□□ -1.95
CMS1YLR003C FUN12P39730 1002 aaKnown RBP2.89□□□□□ -1.95
CMS1YLR003C ERR3P42222 437 aa2.89□□□□□ -1.95
CMS1YLR003C SPG5P42933 373 aa2.89□□□□□ -1.95
CMS1YLR003C CPR6P53691 371 aaKnown RBP2.89□□□□□ -1.95
CMS1YLR003C SMA1Q02651 245 aa2.89□□□□□ -1.95
CMS1YLR003C ATG16Q03818 150 aa2.89□□□□□ -1.95
CMS1YLR003C PET122P10355 254 aa2.88□□□□□ -1.95
CMS1YLR003C GUK1P15454 187 aaKnown RBP2.88□□□□□ -1.95
CMS1YLR003C RAD16P31244 790 aa2.88□□□□□ -1.95
CMS1YLR003C DBF20P32328 564 aa2.88□□□□□ -1.95
CMS1YLR003C LEU5P38702 357 aa2.88□□□□□ -1.95
CMS1YLR003C ACA1P39970 489 aa2.88□□□□□ -1.95
CMS1YLR003C PUG1P40100 303 aa2.88□□□□□ -1.95
CMS1YLR003C UBX6P47049 396 aa2.88□□□□□ -1.95
CMS1YLR003C BOR1P53838 576 aa2.88□□□□□ -1.95
CMS1YLR003C YDR109CQ04585 715 aa2.88□□□□□ -1.95
CMS1YLR003C STP3Q05937 343 aa2.88□□□□□ -1.95
CMS1YLR003C CSR2Q12734 1121 aa2.88□□□□□ -1.95
CMS1YLR003C MSM1P22438 575 aa2.87□□□□□ -1.95
CMS1YLR003C YBR138CP38277 524 aa2.87□□□□□ -1.95
CMS1YLR003C TRS130Q03660 1102 aa2.87□□□□□ -1.95
CMS1YLR003C PFK2P16862 959 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
CMS1YLR003C FRD1P32614 470 aaKnown RBP2.86□□□□□ -1.95
CMS1YLR003C NUP120P35729 1037 aa2.86□□□□□ -1.95
CMS1YLR003C FUI1P38196 639 aa2.86□□□□□ -1.95
CMS1YLR003C SAP185P40856 1058 aa2.86□□□□□ -1.95
CMS1YLR003C SMK1P41808 388 aa2.86□□□□□ -1.95
CMS1YLR003C MRPL13Q02204 264 aa2.86□□□□□ -1.95
CMS1YLR003C UTP21Q06078 939 aaPredicted RBP2.86□□□□□ -1.95
CMS1YLR003C BSC1Q12140 328 aa2.86□□□□□ -1.95
CMS1YLR003C COX17Q12287 69 aa2.86□□□□□ -1.95
CMS1YLR003C RVB2Q12464 471 aaKnown RBP2.86□□□□□ -1.95
CMS1YLR003C TPK1P06244 397 aa2.85□□□□□ -1.95
CMS1YLR003C PCT1P13259 424 aa2.85□□□□□ -1.95
CMS1YLR003C NCP1P16603 691 aaKnown RBP2.85□□□□□ -1.95
CMS1YLR003C YPK3P38070 525 aa2.85□□□□□ -1.95
CMS1YLR003C FSH1P38777 243 aaKnown RBP2.85□□□□□ -1.95
CMS1YLR003C UME6P39001 836 aa2.85□□□□□ -1.95
CMS1YLR003C RPT2P40327 437 aaKnown RBP2.85□□□□□ -1.95
CMS1YLR003C YPI1P43587 155 aa2.85□□□□□ -1.95
CMS1YLR003C YNL234WP53857 426 aa2.85□□□□□ -1.95
CMS1YLR003C ADE16P54113 591 aaKnown RBP2.85□□□□□ -1.95
CMS1YLR003C GTR1Q00582 310 aa2.85□□□□□ -1.95
CMS1YLR003C MTG1Q03151 367 aaPredicted RBP2.85□□□□□ -1.95
CMS1YLR003C EIS1Q05050 843 aaKnown RBP2.85□□□□□ -1.95
CMS1YLR003C SUL2Q12325 893 aa2.85□□□□□ -1.95
CMS1YLR003C SSM4P40318 1319 aa2.85□□□□□ -1.95
CMS1YLR003C SUI3P09064 285 aaKnown RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 102.2 ms