RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W KAR3P17119 729 aa5.65□□□□□ -1.5
SPC42YKL042W FUR1P18562 216 aaKnown RBP5.65□□□□□ -1.5
SPC42YKL042W SAT4P25333 603 aaKnown RBP5.65□□□□□ -1.5
SPC42YKL042W TDA10P42938 290 aa5.65□□□□□ -1.5
SPC42YKL042W CIR1P42940 261 aa5.65□□□□□ -1.5
SPC42YKL042W RMD8P43620 662 aa5.65□□□□□ -1.5
SPC42YKL042W VPS73P53142 486 aaKnown RBP5.65□□□□□ -1.5
SPC42YKL042W SYF1Q04048 859 aaPredicted RBP5.65□□□□□ -1.5
SPC42YKL042W ARG7Q04728 441 aa5.65□□□□□ -1.5
SPC42YKL042W SEC3P33332 1336 aaKnown RBP5.65□□□□□ -1.51
SPC42YKL042W ARG3P05150 338 aa5.64□□□□□ -1.51
SPC42YKL042W PCT1P13259 424 aa5.64□□□□□ -1.51
SPC42YKL042W POL4P25615 582 aa5.64□□□□□ -1.51
SPC42YKL042W YJU2P28320 278 aaPredicted RBP5.64□□□□□ -1.51
SPC42YKL042W NFU1P32860 256 aa5.64□□□□□ -1.51
SPC42YKL042W UGP1P32861 499 aaKnown RBP5.64□□□□□ -1.51
SPC42YKL042W AUR1P36107 401 aaPredicted RBP5.64□□□□□ -1.51
SPC42YKL042W YRB30P53107 440 aaPredicted RBP5.64□□□□□ -1.51
SPC42YKL042W PSR1Q07800 427 aa5.64□□□□□ -1.51
SPC42YKL042W ULA1Q12059 462 aa5.64□□□□□ -1.51
SPC42YKL042W HEM1P09950 548 aaPredicted RBP5.63□□□□□ -1.51
SPC42YKL042W CBS1P14066 229 aa5.63□□□□□ -1.51
SPC42YKL042W CKA1P15790 372 aa5.63□□□□□ -1.51
SPC42YKL042W OCA4P25366 362 aa5.63□□□□□ -1.51
SPC42YKL042W AAD3P25612 363 aa5.63□□□□□ -1.51
SPC42YKL042W EMP70P32802 667 aa5.63□□□□□ -1.51
SPC42YKL042W SOF1P33750 489 aaKnown RBP5.63□□□□□ -1.51
SPC42YKL042W KES1P35844 434 aaKnown RBP5.63□□□□□ -1.51
SPC42YKL042W LHS1P36016 881 aa5.63□□□□□ -1.51
SPC42YKL042W AAP1P37898 856 aaKnown RBP5.63□□□□□ -1.51
SPC42YKL042W UTP9P38882 575 aaKnown RBP5.63□□□□□ -1.51
SPC42YKL042W PHM8P40025 321 aa5.63□□□□□ -1.51
SPC42YKL042W TPA1P40032 644 aaKnown RBP5.63□□□□□ -1.51
SPC42YKL042W ASG1P40467 964 aa5.63□□□□□ -1.51
SPC42YKL042W GLO1P50107 326 aa5.63□□□□□ -1.51
SPC42YKL042W INA17Q02888 182 aa5.63□□□□□ -1.51
SPC42YKL042W YML037CQ03703 340 aa5.63□□□□□ -1.51
SPC42YKL042W CYK3Q07533 885 aa5.63□□□□□ -1.51
SPC42YKL042W RRG1Q12167 365 aaPredicted RBP5.63□□□□□ -1.51
SPC42YKL042W RPN13O13563 156 aa5.62□□□□□ -1.51
SPC42YKL042W RED1P14291 827 aa5.62□□□□□ -1.51
SPC42YKL042W PTC6P25646 442 aa5.62□□□□□ -1.51
SPC42YKL042W AGP2P38090 596 aa5.62□□□□□ -1.51
SPC42YKL042W SEC31P38968 1273 aaKnown RBP5.62□□□□□ -1.51
SPC42YKL042W YEL020CP39994 560 aa5.62□□□□□ -1.51
SPC42YKL042W MRX1P40050 688 aa5.62□□□□□ -1.51
SPC42YKL042W SPO22P40511 975 aa5.62□□□□□ -1.51
SPC42YKL042W LYS4P49367 693 aaPredicted RBP5.62□□□□□ -1.51
SPC42YKL042W RSM28Q03430 361 aa5.62□□□□□ -1.51
SPC42YKL042W UTP21Q06078 939 aaPredicted RBP5.62□□□□□ -1.51
SPC42YKL042W RTC1Q08281 1341 aa5.62□□□□□ -1.51
SPC42YKL042W MET17P06106 444 aa5.61□□□□□ -1.51
SPC42YKL042W SRP54P20424 541 aaKnown RBP5.61□□□□□ -1.51
SPC42YKL042W YMC1P32331 307 aa5.61□□□□□ -1.51
SPC42YKL042W PDB1P32473 366 aaKnown RBP5.61□□□□□ -1.51
SPC42YKL042W REG2P38232 338 aa5.61□□□□□ -1.51
SPC42YKL042W YNG2P38806 282 aaKnown RBP5.61□□□□□ -1.51
SPC42YKL042W EXO1P39875 702 aa5.61□□□□□ -1.51
SPC42YKL042W YJL043WP47053 257 aa5.61□□□□□ -1.51
SPC42YKL042W LCL3P53153 274 aa5.61□□□□□ -1.51
SPC42YKL042W YPL071CQ02864 156 aa5.61□□□□□ -1.51
SPC42YKL042W LEA1Q08963 238 aaPredicted RBP5.61□□□□□ -1.51
SPC42YKL042W SPE4Q12455 300 aa5.61□□□□□ -1.51
SPC42YKL042W HXK2P04807 486 aaKnown RBP5.6□□□□□ -1.51
SPC42YKL042W VMA16P23968 213 aa5.6□□□□□ -1.51
SPC42YKL042W NPL6P32832 435 aa5.6□□□□□ -1.51
SPC42YKL042W RPC34P32910 317 aa5.6□□□□□ -1.51
SPC42YKL042W SRO77P38163 1010 aa5.6□□□□□ -1.51
SPC42YKL042W UBP13P38187 747 aa5.6□□□□□ -1.51
SPC42YKL042W RPS7BP48164 190 aaKnown RBP5.6□□□□□ -1.51
SPC42YKL042W MRK1P50873 501 aa5.6□□□□□ -1.51
SPC42YKL042W STR3P53101 465 aaKnown RBP5.6□□□□□ -1.51
SPC42YKL042W YML122CQ03207 126 aa5.6□□□□□ -1.51
SPC42YKL042W IRC10Q08118 586 aa5.6□□□□□ -1.51
SPC42YKL042W ADE5,7P07244 802 aaKnown RBP5.59□□□□□ -1.51
SPC42YKL042W SPO11P23179 398 aa5.59□□□□□ -1.51
SPC42YKL042W YIH1P25637 258 aa5.59□□□□□ -1.51
SPC42YKL042W AFG3P39925 761 aa5.59□□□□□ -1.51
SPC42YKL042W ECM10P39987 644 aa5.59□□□□□ -1.51
SPC42YKL042W BUR6P40096 142 aa5.59□□□□□ -1.51
SPC42YKL042W RGI2P40188 164 aa5.59□□□□□ -1.51
SPC42YKL042W YIL166CP40445 542 aa5.59□□□□□ -1.51
SPC42YKL042W IST1P53843 298 aaPredicted RBP5.59□□□□□ -1.51
SPC42YKL042W YNL058CP53947 316 aa5.59□□□□□ -1.51
SPC42YKL042W BUD22Q04347 519 aaKnown RBP5.59□□□□□ -1.51
SPC42YKL042W RAD34Q06665 692 aa5.59□□□□□ -1.51
SPC42YKL042W YEH1Q07804 573 aa5.59□□□□□ -1.51
SPC42YKL042W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
SPC42YKL042W BI2P03873 423 aa5.58□□□□□ -1.52
SPC42YKL042W PWP1P21304 576 aaKnown RBP5.58□□□□□ -1.52
SPC42YKL042W ROX1P25042 368 aa5.58□□□□□ -1.52
SPC42YKL042W LCB1P25045 558 aaKnown RBP5.58□□□□□ -1.52
SPC42YKL042W GSH1P32477 678 aa5.58□□□□□ -1.52
SPC42YKL042W ADE17P38009 592 aaKnown RBP5.58□□□□□ -1.52
SPC42YKL042W RPN11P43588 306 aaKnown RBP5.58□□□□□ -1.52
SPC42YKL042W YGR066CP53242 292 aa5.58□□□□□ -1.52
SPC42YKL042W APM1Q00776 475 aaPredicted RBP5.58□□□□□ -1.52
SPC42YKL042W YOR389WQ08912 624 aa5.58□□□□□ -1.52
SPC42YKL042W GET3Q12154 354 aaKnown RBP5.58□□□□□ -1.52
SPC42YKL042W SFI1Q12369 946 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms