RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD2	YKL027W	MSH2	P25847	964 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	BEM1	P29366	551 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	MNN1	P39106	762 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	ALG8	P40351	577 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	FAA4	P47912	694 aa	Known RBP	11.68	□□□□□ -0.54
TCD2	YKL027W	COG7	P53195	279 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	VAC7	P53950	1165 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	HPF1	Q05164	967 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	TDA5	Q06417	326 aa	Known RBP	11.68	□□□□□ -0.54
TCD2	YKL027W	SLP1	Q12232	587 aa		11.68	□□□□□ -0.54
TCD2	YKL027W	RAD3	P06839	778 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	NSP1	P14907	823 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	SRV2	P17555	526 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	UBA1	P22515	1024 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	AMD2	P22580	549 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	YCR051W	P25631	222 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	GUT2	P32191	649 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	CYM1	P32898	989 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	PMT1	P33775	817 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	PHO11	P35842	467 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	STB6	P36085	766 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	YBR259W	P38338	688 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	PHO12	P38693	467 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	HXT5	P38695	592 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	GND1	P38720	489 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	YHR078W	P38799	552 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	ACO2	P39533	789 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	SET2	P46995	733 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	BUD32	P53323	261 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	BIO4	P53630	237 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	FAR8	Q05040	523 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	CIA1	Q05583	330 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	HRK1	Q08732	759 aa	Known RBP	11.67	□□□□□ -0.54
TCD2	YKL027W	NCA2	Q12374	616 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	RMD5	Q12508	421 aa		11.67	□□□□□ -0.54
TCD2	YKL027W	APA1	P16550	321 aa	Known RBP	11.66	□□□□□ -0.54
TCD2	YKL027W	HCM1	P25364	564 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	IRS4	P36115	615 aa	Known RBP	11.66	□□□□□ -0.54
TCD2	YKL027W	SRP72	P38688	640 aa	Known RBP	11.66	□□□□□ -0.54
TCD2	YKL027W	PIK1	P39104	1066 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	IME4	P41833	600 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	YNL058C	P53947	316 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	ADE12	P80210	433 aa	Known RBP	11.66	□□□□□ -0.54
TCD2	YKL027W	YLR177W	Q06251	628 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	YLR053C	Q12026	108 aa		11.66	□□□□□ -0.54
TCD2	YKL027W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	11.65	□□□□□ -0.54	not detected
TCD2	YKL027W	AMD1	P15274	810 aa	Known RBP	11.65	□□□□□ -0.54
TCD2	YKL027W	MF(ALPHA)2	P32435	120 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	SPS19	P32573	292 aa	Known RBP	11.65	□□□□□ -0.54
TCD2	YKL027W	HAT2	P39984	401 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	DSN1	P40568	576 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	GTS1	P40956	396 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	LIA1	P47120	325 aa	Known RBP	11.65	□□□□□ -0.54
TCD2	YKL027W	SPP2	Q02521	185 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	TAF11	Q04226	346 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	HBT1	Q07653	1046 aa	Known RBP	11.65	□□□□□ -0.54
TCD2	YKL027W	RGS2	Q99188	309 aa		11.65	□□□□□ -0.54
TCD2	YKL027W	GLN4	P13188	809 aa	Known RBP	11.64	□□□□□ -0.55
TCD2	YKL027W	SEC14	P24280	304 aa	Known RBP	11.64	□□□□□ -0.55
TCD2	YKL027W	YCR099C	P25657	155 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	GCD11	P32481	527 aa	Known RBP	11.64	□□□□□ -0.55
TCD2	YKL027W	RRP14	P36080	434 aa	Known RBP	11.64	□□□□□ -0.55
TCD2	YKL027W	CIN4	P39110	191 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	PEP8	P40335	379 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	YJR061W	P40355	935 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	TFG1	P41895	735 aa	Predicted RBP	11.64	□□□□□ -0.55
TCD2	YKL027W	YJL107C	P42947	387 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	PET130	P47065	347 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	NPY1	P53164	384 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	SWC4	P53201	476 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	RCF2	P53721	224 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	YDR131C	Q03899	556 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	BUD7	Q08754	746 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	NUS1	Q12063	375 aa		11.64	□□□□□ -0.55
TCD2	YKL027W	MPH2	P0CD99	609 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	GAL11	P19659	1081 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	CHL1	P22516	861 aa	Predicted RBP	11.63	□□□□□ -0.55
TCD2	YKL027W	GIP1	P38229	639 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	YHR182W	P38870	785 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	YJL206C	P39529	758 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	NIS1	P53939	407 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	AQR1	P53943	586 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	SMA1	Q02651	245 aa		11.63	□□□□□ -0.55
TCD2	YKL027W	RPC11	Q04307	110 aa	Predicted RBP	11.63	□□□□□ -0.55
TCD2	YKL027W	STE2	D6VTK4	431 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	ABF1	P14164	731 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	CCR4	P31384	837 aa	Known RBP	11.62	□□□□□ -0.55
TCD2	YKL027W	YKL151C	P36059	337 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	LIN1	P38852	340 aa	Predicted RBP	11.62	□□□□□ -0.55
TCD2	YKL027W	HOS4	P40480	1083 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	IRR1	P40541	1150 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	YMR209C	Q03648	457 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	BLS1	Q06071	122 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	VTA1	Q06263	330 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	OPI10	Q08202	246 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	YMR030W-A	Q3E760	96 aa		11.62	□□□□□ -0.55
TCD2	YKL027W	SEM1	O94742	89 aa		11.61	□□□□□ -0.55
TCD2	YKL027W	MRPL9	P31334	269 aa		11.61	□□□□□ -0.55
TCD2	YKL027W	PHA2	P32452	334 aa		11.61	□□□□□ -0.55
TCD2	YKL027W	PRP18	P33411	251 aa	Predicted RBP	11.61	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms