RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W CTI6Q08923 506 aa4.52□□□□□ -1.69
AVT1YJR001W NMD4Q12129 218 aa4.52□□□□□ -1.69
AVT1YJR001W GET3Q12154 354 aaKnown RBP4.52□□□□□ -1.69
AVT1YJR001W SKM1Q12469 655 aa4.52□□□□□ -1.69
AVT1YJR001W LAM4P38800 1345 aa4.52□□□□□ -1.69
AVT1YJR001W CDC37P06101 506 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W BIK1P11709 440 aa4.51□□□□□ -1.69
AVT1YJR001W URA7P28274 579 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W CYS3P31373 394 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W HMX1P32339 317 aa4.51□□□□□ -1.69
AVT1YJR001W ADH5P38113 351 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W COS111P38308 924 aa4.51□□□□□ -1.69
AVT1YJR001W YTA12P40341 825 aa4.51□□□□□ -1.69
AVT1YJR001W PRM2P40534 656 aa4.51□□□□□ -1.69
AVT1YJR001W KAP114P53067 1004 aa4.51□□□□□ -1.69
AVT1YJR001W YBP2P53169 641 aa4.51□□□□□ -1.69
AVT1YJR001W YSA1Q01976 231 aa4.51□□□□□ -1.69
AVT1YJR001W RVB1Q03940 463 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W ECM7Q06200 448 aa4.51□□□□□ -1.69
AVT1YJR001W ATG17Q06410 417 aa4.51□□□□□ -1.69
AVT1YJR001W SYO1Q07395 620 aa4.51□□□□□ -1.69
AVT1YJR001W HUA2Q12134 243 aa4.51□□□□□ -1.69
AVT1YJR001W HER1Q12276 1246 aa4.51□□□□□ -1.69
AVT1YJR001W AVL9Q12500 764 aa4.51□□□□□ -1.69
AVT1YJR001W ISN1Q99312 450 aa4.51□□□□□ -1.69
AVT1YJR001W TY1B-NL2Q99337 1749 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W TY1A-LR4P0C2I8 440 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W TY1A-DR6P0CX70 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-ER1P0CX71 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-LR2P0CX72 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-PLP0CX73 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-JR1P0CX74 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-LR3P0CX75 440 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-ML2P0CX76 440 aa4.51□□□□□ -1.69
AVT1YJR001W SIR1P21691 654 aa4.51□□□□□ -1.69
AVT1YJR001W PRD1P25375 712 aa4.51□□□□□ -1.69
AVT1YJR001W PAT1P25644 796 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W CAP1P28495 268 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W TRK2P28584 889 aa4.51□□□□□ -1.69
AVT1YJR001W MSP1P28737 362 aa4.51□□□□□ -1.69
AVT1YJR001W HXT4P32467 576 aa4.51□□□□□ -1.69
AVT1YJR001W YMR262WP38430 313 aa4.51□□□□□ -1.69
AVT1YJR001W YHL012WP38709 493 aa4.51□□□□□ -1.69
AVT1YJR001W NEM1P38757 446 aa4.51□□□□□ -1.69
AVT1YJR001W SMF1P38925 575 aa4.51□□□□□ -1.69
AVT1YJR001W JJJ2P46997 583 aa4.51□□□□□ -1.69
AVT1YJR001W BPL1P48445 690 aaPredicted RBP4.51□□□□□ -1.69
AVT1YJR001W YGL242CP53066 181 aa4.51□□□□□ -1.69
AVT1YJR001W ASI1P54074 624 aa4.51□□□□□ -1.69
AVT1YJR001W YMR102CQ03177 834 aa4.51□□□□□ -1.69
AVT1YJR001W DML1Q03652 475 aa4.51□□□□□ -1.69
AVT1YJR001W GIS4Q04233 774 aa4.51□□□□□ -1.69
AVT1YJR001W ARP10Q04549 284 aa4.51□□□□□ -1.69
AVT1YJR001W ECM18Q04623 453 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-GR1Q12085 440 aa4.51□□□□□ -1.69
AVT1YJR001W GLO4Q12320 285 aa4.51□□□□□ -1.69
AVT1YJR001W CMC2Q3E7A4 109 aa4.51□□□□□ -1.69
AVT1YJR001W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W TY1A-OLQ92392 440 aaKnown RBP4.51□□□□□ -1.69
AVT1YJR001W SRN2Q99176 213 aa4.51□□□□□ -1.69
AVT1YJR001W GLN4P13188 809 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W MSS116P15424 664 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W YPK2P18961 677 aa4.5□□□□□ -1.69
AVT1YJR001W MRPS28P21771 286 aa4.5□□□□□ -1.69
AVT1YJR001W AMS1P22855 1083 aa4.5□□□□□ -1.69
AVT1YJR001W PHO91P27514 894 aa4.5□□□□□ -1.69
AVT1YJR001W KNS1P32350 737 aaPredicted RBP4.5□□□□□ -1.69
AVT1YJR001W PHO11P35842 467 aa4.5□□□□□ -1.69
AVT1YJR001W PHO12P38693 467 aa4.5□□□□□ -1.69
AVT1YJR001W MSC7P38694 644 aa4.5□□□□□ -1.69
AVT1YJR001W SEC31P38968 1273 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W MAD2P40958 196 aa4.5□□□□□ -1.69
AVT1YJR001W SSU1P41930 458 aa4.5□□□□□ -1.69
AVT1YJR001W LIA1P47120 325 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W NIT3P49954 291 aa4.5□□□□□ -1.69
AVT1YJR001W COG2P53271 262 aa4.5□□□□□ -1.69
AVT1YJR001W BRE5P53741 515 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W RCM1P53972 490 aa4.5□□□□□ -1.69
AVT1YJR001W MRS2Q01926 470 aa4.5□□□□□ -1.69
AVT1YJR001W NGL3Q03210 505 aa4.5□□□□□ -1.69
AVT1YJR001W RKM2Q03942 479 aa4.5□□□□□ -1.69
AVT1YJR001W GFD1Q04839 188 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W DFG5Q05031 458 aa4.5□□□□□ -1.69
AVT1YJR001W GMC2Q06201 188 aa4.5□□□□□ -1.69
AVT1YJR001W SKG3Q06315 1026 aa4.5□□□□□ -1.69
AVT1YJR001W FMP45Q07651 309 aa4.5□□□□□ -1.69
AVT1YJR001W TLG2Q08144 397 aa4.5□□□□□ -1.69
AVT1YJR001W RTK1Q12100 620 aaPredicted RBP4.5□□□□□ -1.69
AVT1YJR001W RPN5Q12250 445 aaKnown RBP4.5□□□□□ -1.69
AVT1YJR001W YBR126W-AQ8TGU7 68 aa4.5□□□□□ -1.69
AVT1YJR001W PSK1P31374 1356 aa4.5□□□□□ -1.69
AVT1YJR001W ADE3P07245 946 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W YML002WP0CF17 737 aa4.49□□□□□ -1.69
AVT1YJR001W MSB1P21339 1137 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W SRP101P32916 621 aa4.49□□□□□ -1.69
AVT1YJR001W RPT5P33297 434 aaKnown RBP4.49□□□□□ -1.69
AVT1YJR001W MAC1P35192 417 aa4.49□□□□□ -1.69
AVT1YJR001W NUP133P36161 1157 aa4.49□□□□□ -1.69
AVT1YJR001W SHM1P37292 490 aaPredicted RBP4.49□□□□□ -1.69
AVT1YJR001W MUP3P38734 546 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms