RNA–Protein interactions for RNA: YIL115C

NUP159, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP159, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP159	YIL115C	RPT1	P33299	467 aa	Known RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	UIP5	P36137	443 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	MAK5	P38112	773 aa	Predicted RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	SDH8	P38345	138 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	GDI1	P39958	451 aa	Known RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	LYS4	P49367	693 aa	Predicted RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	RPS15	Q01855	142 aa	Known RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	ADE13	Q05911	482 aa	Known RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	KAP95	Q06142	861 aa	Known RBP	3.59	□□□□□ -1.84
NUP159	YIL115C	CDC73	Q06697	393 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	SYT1	Q06836	1226 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	YPL260W	Q08977	551 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	RPN6	Q12377	434 aa		3.59	□□□□□ -1.84
NUP159	YIL115C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
NUP159	YIL115C	MRP2	P10663	115 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	SLY1	P22213	666 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PEX1	P24004	1043 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PHO89	P38361	574 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	STP2	P38704	541 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PEP8	P40335	379 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	THI6	P41835	540 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	NIT3	P49954	291 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SNF12	P53628	566 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	BOP2	Q06150	570 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SSP2	Q08646	371 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	YOR342C	Q12182	319 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PTC5	Q12511	572 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	TEF1	P02994	458 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	GPA2	P10823	449 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	AEP2	P22136	580 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	MRPL8	P22353	238 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SAN1	P22470	610 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	GDH2	P33327	1092 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	TEF4	P36008	412 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	LEU5	P38702	357 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	RSP5	P39940	809 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	OPT1	P40897	799 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	CIT3	P43635	486 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	YJR030C	P47101	745 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	GTF1	P53260	183 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	ESBP6	P53918	673 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	YNL010W	P53981	241 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	CEG1	Q01159	459 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	REC102	Q02721	264 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SCS7	Q03529	384 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	NEJ1	Q06148	342 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	HAL9	Q12180	1030 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	VTH1	P40438	1549 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	VTH2	P40890	1549 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	IPP1	P00817	287 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	CHO2	P05374	869 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	GPH1	P06738	902 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	SNF1	P06782	633 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	ILV2	P07342	687 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	KIN2	P13186	1147 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	ALG1	P16661	449 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	CKA2	P19454	339 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	FUN26	P31381	517 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	CDC5	P32562	705 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	BIO3	P50277	480 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	CWC27	Q02770	301 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	RKM2	Q03942	479 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PRM6	Q04705	352 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	RRN11	Q04712	507 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	YDL114W	Q07530	308 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	FMP45	Q07651	309 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	NTG2	Q08214	380 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	IDI1	P15496	288 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	EUG1	P32474	517 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	PRP21	P32524	280 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	SRP102	P36057	244 aa	Predicted RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	TFA2	P36145	328 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	GEF1	P37020	779 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	ERG7	P38604	731 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	MSR1	P38714	643 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	END3	P39013	349 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	MNN9	P39107	395 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	RPL17B	P46990	184 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	RSM26	P47141	266 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	LYS20	P48570	428 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	SOL4	P53315	255 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	ECM11	Q04110	302 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SEG1	Q04279	960 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	UBX5	Q06682	500 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	REH1	Q06709	432 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	SUB2	Q07478	446 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	YDL124W	Q07551	312 aa	Known RBP	3.58	□□□□□ -1.84
NUP159	YIL115C	FRE5	Q08908	694 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	RBD2	Q12270	262 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	YLR278C	Q05854	1341 aa		3.58	□□□□□ -1.84
NUP159	YIL115C	CDC23	P16522	626 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	FUR1	P18562	216 aa	Known RBP	3.57	□□□□□ -1.84
NUP159	YIL115C	YSP3	P25036	478 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	SEC1	P30619	724 aa	Known RBP	3.57	□□□□□ -1.84
NUP159	YIL115C	VMA6	P32366	345 aa	Known RBP	3.57	□□□□□ -1.84
NUP159	YIL115C	SPO23	P33757	523 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	TSC10	P38342	320 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	APM2	P38700	605 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	YDR089W	P38966	869 aa		3.57	□□□□□ -1.84
NUP159	YIL115C	KHA1	P40309	873 aa		3.57	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms