RNA–Protein interactions for RNA: YHR042W

NCP1, Transcript of NADP-cytochrome P450 reductase, yeast

Gene NCP1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCP1	YHR042W	COR1	P07256	457 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	ABF1	P14164	731 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	APE4	P38821	490 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	SEO1	P39709	593 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	YJR154W	P47181	346 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	GPI1	P53306	609 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	ARC35	P53731	342 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	SFB2	P53953	876 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	TAF12	Q03761	539 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	TRE2	Q08693	809 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	MUM3	Q08750	479 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	CMR1	Q12510	522 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	NHA1	Q99271	985 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	CCA1	P21269	546 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	YCR090C	P25654	182 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	KAP104	P38217	918 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	YBR259W	P38338	688 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	SEC28	P40509	296 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	IAH1	P41734	238 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	RPN9	Q04062	393 aa	Known RBP	11.32	□□□□□ -0.6
NCP1	YHR042W	SGT1	Q08446	395 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	PSY3	Q12318	242 aa		11.32	□□□□□ -0.6
NCP1	YHR042W	CCP1	P00431	361 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	SSA1	P10591	642 aa	Known RBP	11.31	□□□□□ -0.6
NCP1	YHR042W	TRX2	P22803	104 aa	Known RBP	11.31	□□□□□ -0.6
NCP1	YHR042W	CNA1	P23287	553 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	MRP21	P38175	177 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	BSD2	P38356	321 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	TVP23	P38962	199 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	SNG1	P46950	547 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	NOP19	P53317	196 aa	Predicted RBP	11.31	□□□□□ -0.6
NCP1	YHR042W	HSP31	Q04432	237 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	ATP6	P00854	259 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	NPL6	P32832	435 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	PTM1	P32857	523 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	SIF2	P38262	535 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	ELO3	P40319	345 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	YJR061W	P40355	935 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	SLM2	P53955	656 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	TMA20	P89886	181 aa	Predicted RBP	11.31	□□□□□ -0.6
NCP1	YHR042W	YDR131C	Q03899	556 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	APC5	Q08683	685 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	ULA1	Q12059	462 aa		11.31	□□□□□ -0.6
NCP1	YHR042W	SSA4	P22202	642 aa	Known RBP	11.3	□□□□□ -0.6
NCP1	YHR042W	DPB2	P24482	689 aa	Predicted RBP	11.3	□□□□□ -0.6
NCP1	YHR042W	LHS1	P36016	881 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	VRP1	P37370	817 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	ALD5	P40047	520 aa	Known RBP	11.3	□□□□□ -0.6
NCP1	YHR042W	YIR007W	P40566	764 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	PEX8	P53248	589 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	AIM32	Q04689	311 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	ESC8	Q08119	714 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	HUA2	Q12134	243 aa		11.3	□□□□□ -0.6
NCP1	YHR042W	TPK2	P06245	380 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	YSP3	P25036	478 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	GRS1	P38088	690 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	UTP9	P38882	575 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	RAD55	P38953	406 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	MNN1	P39106	762 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	YHB1	P39676	399 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	GIP4	P39732	760 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	AIM20	P40451	204 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	YNL033W	P53964	284 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	YNL019C	P53975	284 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	GAS3	Q03655	524 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	RIF2	Q06208	395 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	ECM30	Q06673	1274 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	YOL159C	Q08300	171 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	AMD1	P15274	810 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	11.29	□□□□□ -0.6	not detected
NCP1	YHR042W	SPB1	P25582	841 aa	Predicted RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	BCK2	P33306	851 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	ARB1	P40024	610 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	COA1	P40452	197 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	CDC14	Q00684	551 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	MTD1	Q02046	320 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	FMP30	Q02883	468 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	SMP3	Q04174	516 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	CST9	Q06032	482 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	GMC2	Q06201	188 aa		11.29	□□□□□ -0.6
NCP1	YHR042W	PKH2	Q12236	1081 aa	Known RBP	11.29	□□□□□ -0.6
NCP1	YHR042W	SEC53	P07283	254 aa	Known RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	YCK2	P23292	546 aa	Known RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	BUB2	P26448	306 aa	Predicted RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	YGR053C	P53234	283 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	INP2	Q03824	705 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	YMR226C	Q05016	267 aa	Known RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	PMT7	Q06644	662 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	REH1	Q06709	432 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	RVS161	P25343	265 aa	Known RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	YCR099C	P25657	155 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	PTP2	P29461	750 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	MDJ1	P35191	511 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	YKR015C	P36111	568 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	YBR138C	P38277	524 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	NUP60	P39705	539 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	MET14	Q02196	202 aa		11.28	□□□□□ -0.6
NCP1	YHR042W	YLR225C	Q05948	407 aa	Known RBP	11.28	□□□□□ -0.6
NCP1	YHR042W	MSS116	P15424	664 aa	Known RBP	11.27	□□□□□ -0.61
NCP1	YHR042W	RAD16	P31244	790 aa		11.27	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms