RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	YLR413W	Q06689	675 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	HBT1	Q07653	1046 aa	Known RBP	3.43	□□□□□ -1.86
CCM1	YGR150C	XYL2	Q07993	356 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	OSW2	Q12202	724 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	AVL9	Q12500	764 aa		3.43	□□□□□ -1.86
CCM1	YGR150C	SOD2	P00447	233 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	SUP35	P05453	685 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	PRE4	P30657	266 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	AFG1	P32317	509 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	PGM1	P33401	570 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	THI2	P38141	450 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	MAL33	P38157	468 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	KSP1	P38691	1029 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	PXA1	P41909	870 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	DLD2	P46681	530 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	ASE1	P50275	885 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	TAM41	P53230	385 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	RHO5	P53879	331 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	YNL050C	P53952	270 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	SMA1	Q02651	245 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	GPR1	Q12361	961 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	TFB5	Q3E7C1	72 aa	Predicted RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	LPD1	P09624	499 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	RPL5	P26321	297 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	PRP45	P28004	379 aa	Predicted RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	CMC1	P36064	111 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	GDT1	P38301	280 aa	Predicted RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	YIL108W	P40483	696 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	SSY5	P47002	699 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	YDL183C	P48569	320 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	APT1	P49435	187 aa	Known RBP	3.42	□□□□□ -1.86
CCM1	YGR150C	SDH1	Q00711	640 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	YML037C	Q03703	340 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	PPM1	Q04081	328 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	VPS20	Q04272	221 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	YPL272C	Q08984	517 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	ELG1	Q12050	791 aa		3.42	□□□□□ -1.86
CCM1	YGR150C	TPK2	P06245	380 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	CAR2	P07991	424 aa	Known RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	RME1	P32338	300 aa	Known RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	ASF2	P32448	525 aa	Predicted RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	KRE6	P32486	720 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	PMT1	P33775	817 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	GIP2	P40036	548 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	EFM3	P47163	339 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	YNL143C	P53908	130 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	PPN1	Q04119	674 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	ASM4	Q05166	528 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	VPS38	Q05919	439 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	ARR1	Q06596	294 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	TRE1	Q08919	783 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	BUG1	Q12191	341 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	ERG27	Q12452	347 aa	Known RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	CBP2	P03874	630 aa	Predicted RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	FBP1	P09201	348 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	PYC1	P11154	1178 aa	Known RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	CLC1	P17891	233 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	ELP2	P42935	788 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	MTR3	P48240	250 aa	Predicted RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	YGL242C	P53066	181 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	REX2	P54964	269 aa	Known RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	SNZ1	Q03148	297 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	YDR239C	Q03780	787 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	STP3	Q05937	343 aa		3.41	□□□□□ -1.86
CCM1	YGR150C	MRPL23	Q12487	163 aa	Predicted RBP	3.41	□□□□□ -1.86
CCM1	YGR150C	GCD2	P12754	651 aa	Predicted RBP	3.4	□□□□□ -1.86
CCM1	YGR150C	UNG1	P12887	359 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	PRP6	P19735	899 aa	Predicted RBP	3.4	□□□□□ -1.86
CCM1	YGR150C	BUD14	P27637	709 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	GEX2	P36173	615 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	SLM4	P38247	162 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	LIN1	P38852	340 aa	Predicted RBP	3.4	□□□□□ -1.86
CCM1	YGR150C	ASG1	P40467	964 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	SMC3	P47037	1230 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	YGR054W	P53235	642 aa	Known RBP	3.4	□□□□□ -1.86
CCM1	YGR150C	TWF1	P53250	332 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	DOT1	Q04089	582 aa	Known RBP	3.4	□□□□□ -1.86
CCM1	YGR150C	SEG1	Q04279	960 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	VPS36	Q06696	566 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	RBD2	Q12270	262 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	NBL1	Q3E7Y6	73 aa		3.4	□□□□□ -1.86
CCM1	YGR150C	GAL80	P04387	435 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	FAA1	P30624	700 aa	Known RBP	3.4	□□□□□ -1.87
CCM1	YGR150C	SEC66	P33754	206 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	TPO5	P36029	618 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	STB5	P38699	743 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	AKR1	P39010	764 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	MNN9	P39107	395 aa	Known RBP	3.4	□□□□□ -1.87
CCM1	YGR150C	YIL077C	P40508	320 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	PET130	P47065	347 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	YPL108W	Q02872	168 aa	Predicted RBP	3.4	□□□□□ -1.87
CCM1	YGR150C	RBS1	Q05672	457 aa	Known RBP	3.4	□□□□□ -1.87
CCM1	YGR150C	TSR1	Q07381	788 aa	Known RBP	3.4	□□□□□ -1.87
CCM1	YGR150C	GSH2	Q08220	491 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	YOR223W	Q12015	292 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	YDR061W	Q12298	539 aa		3.4	□□□□□ -1.87
CCM1	YGR150C	COQ4	O13525	335 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	RPL3	P14126	387 aa	Known RBP	3.39	□□□□□ -1.87
CCM1	YGR150C	CDC42	P19073	191 aa		3.39	□□□□□ -1.87
CCM1	YGR150C	PRD1	P25375	712 aa		3.39	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms